Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0717 ATGAGTAGCCTTCACACACCAAATCTGCATATCTTTCATCTAGCACAGTATCTGTCTCCACTCACACTCTCGCTCCAGAAGCACTCCGGCGACTTCTCCGGTCAAGTTCTGGCAGCAGTTCCACCTAAGCGGCCATGGGAAGAGAATGAGGAGACGCCGGCGTTCATCATGTCGGTTTCCTGCACTGACTACTTCCCCGATTCCGACCTTCTCTGCGACGAGGACACCTCCGGAATCTTGTCCGGAGAGTCGACGGAGTGTTCTTCCGACCTCGATTCCTCTCCGTGGTCCACGGAAGAGTCGATCGCCGGATTTATCGAACACGAGCGCAGCTTCGTTCCGCGATGCGAGTACTTTTCTAGGTTCCAGTCCCAATCGCTTGACGCCTCGGCGAGAGAGGAATCTGTTGCATGGATTCTCAAGGTACAAGCTTACTTTGGGTTTCAACCGCTGACGGCGTATCTTTCCGTCAACTACATGGATCGGTTTTTGGATTCGCGGCAGCTGCCGCAAGCAAATGGGTGGCCACTGCAACTTCTGTCCGTTGCCTGTTTGTCTTTAGCTGCAAAGATGGAGGAACCTTTAGTTCCGGCCCTTGTGGATCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCGAAAACGATTCGTAGGATGGAACTGCTGGTTCTAGGTGCTTTGGATTGGAGACTAAGATCAGTCACGCCCTTCAACTTCCTCAGTTTCTTTGCGAGCAAGCTCGATTCAACTGGAACTTTTACTGGCTTCCTTATTTCACGAGCTACAGAAATCGTCTTATCAAATATCCAAGAGGCTAGTTTTCTTGCGTACTGGCCATCATGCATTGCTGCCGCCTCCATACTCTGTGCAGCAAATGAAATTCCTAATTGGTCTCTCGTCAGGCCTGAGCATGCTGAGTCATGGTGTGATGGGCTTAGAAAAGAGAAGATTATAGGTTGCTACCAGTTCATGCGAGAATTTGTGATTAGCAATAGCCAGACGAAGCCCCCCAAAATGTTCCCACAGCTTCGAGTAACAACGAGGCTCACAACAAAGTCAAGTATGTCATCATACTCATCATTTTCCTCTTCATCCTCTTCCTCATCACCTTACAAAAGGAGGAAATTAAATAGCTGCTTGTGGGTAGATGACAACGACGACAAAGGACACTCTGAGTGA 1179 0.4911 MSSLHTPNLHIFHLAQYLSPLTLSLQKHSGDFSGQVLAAVPPKRPWEENEETPAFIMSVSCTDYFPDSDLLCDEDTSGILSGESTECSSDLDSSPWSTEESIAGFIEHERSFVPRCEYFSRFQSQSLDASAREESVAWILKVQAYFGFQPLTAYLSVNYMDRFLDSRQLPQANGWPLQLLSVACLSLAAKMEEPLVPALVDLQVEGAKYIFEPKTIRRMELLVLGALDWRLRSVTPFNFLSFFASKLDSTGTFTGFLISRATEIVLSNIQEASFLAYWPSCIAAASILCAANEIPNWSLVRPEHAESWCDGLRKEKIIGCYQFMREFVISNSQTKPPKMFPQLRVTTRLTTKSSMSSYSSFSSSSSSSSPYKRRKLNSCLWVDDNDDKGHSE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0717 392 Pfam Cyclin, N-terminal domain 104 231 IPR006671 -
Acco12g0717 392 SUPERFAMILY Cyclin-like 216 338 IPR036915 -
Acco12g0717 392 SMART Cyclin_C_2 234 370 IPR004367 -
Acco12g0717 392 ProSitePatterns Cyclins signature. 132 163 IPR006671 -
Acco12g0717 392 CDD CYCLIN_AtCycD-like_rpt1 131 229 - -
Acco12g0717 392 Gene3D - 106 295 - -
Acco12g0717 392 CDD CYCLIN_AtCycD-like_rpt2 234 324 - -
Acco12g0717 392 Gene3D - 115 232 - -
Acco12g0717 392 FunFam D2/4-type cyclin 115 232 - -
Acco12g0717 392 Pfam Cyclin, C-terminal domain 234 344 IPR004367 -
Acco12g0717 392 SUPERFAMILY Cyclin-like 94 231 IPR036915 -
Acco12g0717 392 MobiDBLite consensus disorder prediction 354 373 - -
Acco12g0717 392 PANTHER CYCLINS 100 332 IPR039361 -
Acco12g0717 392 SMART cyclin_7 137 225 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0717 Acco-ChrAcco12 6686483 6689726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0717 57 384 Core Cell Cycle Gene Families AT1G70210 63.855 5.19e-135 388