Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0697 ATGCCATATTTTGCAATGTCTTGGGCTCACTCTCAAAATCTGCAGAATAATGGTCACATGGCTGGCCAGCCAATTCTTTCTCCATCCCCTTCGTCTCCTCCATTGCCTTACATTTCTAACTTCCAGAAGCAAATAAGCCCACCTCCAGTTTCTTCATCTGGGAACAAAATAAGTCCAGCAGTTCTTTTCATCATAGTTGTTCTAGCTATTGTGTTTTTCATTTCGGGTCTCCTTCACCTGCTTGTTAGATTTCTCATAAAGCACAGGTCTTCTTCATCAATTTCTCAATCCAATAGATACCCAGATATGTCTGAATCAGATGCTTACCAGAGACAGTTACAGCAGCTGTTTCATCTTCATGATTCAGGATTGGATCAGGCTTTCATAGATGCTCTTCCTGTCTTCTTTTACAAGGAGATAATTGGCTTGAAAGAGCCATTTGATTGTGCTGTTTGCCTTTGTGAATTCTCAGATCATGACAAGCTTAGGTTGCTGCCTATGTGCAACCATGCTTTTCACATTGACTGTATAGACACATGGTTGTTGTCTAATTCAACTTGTCCTCTCTGTAGAGGGACTCTGCACACACCAGGATTTCCCTTTGAAAACCCAGTTTTAAACTTCGAAGATCCAAGCGAAGACGACGGGTTTCCAGCAGGCTCTGTTGGAGGTGATGCTGCTTCTGTTCACAAACATGCAGAAAATCACATTATGAGTGGAAGAAGGGTGTTTTCTGTGAGACTTGGAAAATTCAGAAGCTCAAATACCAGACAAGGAGTAGAAAAATGTGAAGGAGAGAGCAGTGCTAGTAGTAGTAATTTGGATGCAAGGAGATGCTATTCAATGGGGTCTTTCCAGTATGTTGTTGCTGATTCAGATTTAAGAGTAGCTTTATGCCCCGATAGGGGTGATGTGAGTAGTAGCAGTATGAGACAGTTGAAAGTGCGAGTAGCTCAAATTGGGAATAATCCCTCTGCTGATTCTGACTTTGAGGGCAAAAAACTCAACATTGCAAGGAAAGGGGAAAGCTTTTCTGTTTCCAAGATCTGGTTATGGTCTAAGAAGGATAAATCACCAAGTTCTTCAGTTACCCAAATGGGAAATTCTACTAATGTCACTGCAAATTTGCCTTGGATGAATAGAACTAGAGTGCTAAGAACATTAAGTGAGCTGTAA 1176 0.4133 MPYFAMSWAHSQNLQNNGHMAGQPILSPSPSSPPLPYISNFQKQISPPPVSSSGNKISPAVLFIIVVLAIVFFISGLLHLLVRFLIKHRSSSSISQSNRYPDMSESDAYQRQLQQLFHLHDSGLDQAFIDALPVFFYKEIIGLKEPFDCAVCLCEFSDHDKLRLLPMCNHAFHIDCIDTWLLSNSTCPLCRGTLHTPGFPFENPVLNFEDPSEDDGFPAGSVGGDAASVHKHAENHIMSGRRVFSVRLGKFRSSNTRQGVEKCEGESSASSSNLDARRCYSMGSFQYVVADSDLRVALCPDRGDVSSSSMRQLKVRVAQIGNNPSADSDFEGKKLNIARKGESFSVSKIWLWSKKDKSPSSSVTQMGNSTNVTANLPWMNRTRVLRTLSEL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0697 391 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 197 IPR013083 -
Acco12g0697 391 SMART ring_2 149 190 IPR001841 -
Acco12g0697 391 ProSiteProfiles Zinc finger RING-type profile. 149 191 IPR001841 -
Acco12g0697 391 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 52 350 - -
Acco12g0697 391 SUPERFAMILY RING/U-box 128 197 - -
Acco12g0697 391 FunFam RING-H2 finger protein ATL46 111 196 - -
Acco12g0697 391 Pfam Ring finger domain 148 191 IPR001841 -
Acco12g0697 391 CDD RING-H2_EL5-like 148 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0697 Acco-ChrAcco12 6491126 6492444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0697 50 363 C3H Transcription Factor Family AT2G18650 41.399 4.98e-60 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0697 12 6491126 6492444 Acco12g0697 12 6491126 6492444 ECH