Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0685 ATGCGTTCTGCTTTTCTTCGTCTTCCTCAACAAGCGCGTGTTCGCAAGTTGATTCACTATCCACGTGTGTATAGAATGGTTATAATCGGCGAGAAAATTATGTCATCCATTCCAATACATTCGCCACTGCTAGTAAGAACAACCCAAGGGGAAAAAATGACTTCATCGATTCGGATCTCAAGGCTGCTCTCTCGCTCTCTCGCTTCTGCTTCTTTGCTTGCTCGGGGAGGTGGGAATGGTTACTTGGGCAGAGGACTGAATAAATACAGTACTGCTTCTGCTGCTCTTGAAGAACCGATTAAGCCATCGATTCAAGTGGAACACACTCAGCTCCTAATCGATGGGAAGTTCGTGGATGCTGCTTCAGGCAAAACTTTTCCAACTTTGGACCCCAGGACAGGGGAAGCGATTGCACATGTTGCTGAGGGTGACTCTGAAGATGTAGATCGAGCAGTTGTAGCTGCACGCAAGGCATTTGATGAAGGGCCTTGGACAAAAATGACAGCCTATGAAAGACAAAAGATATTGTTGCGTGCTGCTGATCTTATTGAGAAGCATAACGATGAACTTGCGACACTTGAGACCTGGGATAATGGGAAGCCATATGCCCAAGCTGCTCAAATTGAAGTCCCCATGTTGGTTCGTCTAATTCGATACTATGCTGGTTGGGCTGATAAGATTCATGGCCTCACGGTTCCTGCTGATGGATCATATCATGTGCAAACATTGCATGAACCAATTGGTGTTGCCGGTCAGATCATTCCTTGGAACTTCCCTCTTCTCATGTTTGCATGGAAAATTGGGCCTGCGTTGGCATGTGGCAACACTATCGTTTTGAAAACAGCTGAACAAACGCCATTATCTGCTTTATATGCAGCAAAGCTATTCCATGAGGCTGGGCTTCCTTCTGGTGTTTTGAATGTTATATCTGGCTTTGGTCCAACTGCTGGTGCTGCTGTTGCTAGTCACATGGATATTGACAAGGTTGCTTTTACTGGATCAACTGATACTGGAAAAATCGTCCTTGAACTGGCAGCAAAAAGTAATCTCAAGACTGTAACTTTAGAACTTGGAGGGAAATCCCCTTTCATTGTATGTGAAGATGCTGATGTAGATCAAGCTGTAGAGGCAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTCGTACATTTGTACATGAAAGTATATATGATGAATTCGTTGAGAAAGCAAAGGCGCGTGCCTTGAAACGTGCTGTTGGTGATCCATTCAAAGGAGGAATAGAGCAAGGTCCTCAGATTGATTCTGAGCAATTTGAGAAGATACTGAAGTATATAAGATCTGGTGTTGAAAGTGGAGCGACTCTAGAAACTGGAGGAGAGAGACTAGGAGATGCAGGCTTCTATATCAAGCCCACCGTGTTTACAAATGTTCAGGACAATATGTTGATCGCGAAGGATGAGATATTTGGCCCTGTGCAATCCATTTTGAAATTTAAGGACATTGATGAAGTGATTAGAAGAGCAAACAACACGCGTTATGGCCTTGCAGCTGGGGTGTTCACGAAAAACATAGCCACAGCAAACACTCTGACTCGAGCACTGCGAGCTGGGACCGTATGGGTAAACTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGAGGGTACAAGATGAGTGGTCAAGGCAGAGAAAAGGGGATTTACAGTCTTCGAAATTACTTGCAAGTGAAGGCCGTTGTTACTCCCTTGGAGAACCCAGCATGGCTTTGA 1770 0.4475 MRSAFLRLPQQARVRKLIHYPRVYRMVIIGEKIMSSIPIHSPLLVRTTQGEKMTSSIRISRLLSRSLASASLLARGGGNGYLGRGLNKYSTASAALEEPIKPSIQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEAIAHVAEGDSEDVDRAVVAARKAFDEGPWTKMTAYERQKILLRAADLIEKHNDELATLETWDNGKPYAQAAQIEVPMLVRLIRYYAGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKIGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPSGVLNVISGFGPTAGAAVASHMDIDKVAFTGSTDTGKIVLELAAKSNLKTVTLELGGKSPFIVCEDADVDQAVEAAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRAVGDPFKGGIEQGPQIDSEQFEKILKYIRSGVESGATLETGGERLGDAGFYIKPTVFTNVQDNMLIAKDEIFGPVQSILKFKDIDEVIRRANNTRYGLAAGVFTKNIATANTLTRALRAGTVWVNCFDTFDAAIPFGGYKMSGQGREKGIYSLRNYLQVKAVVTPLENPAWL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0685 589 CDD ALDH_F2BC 106 581 - -
Acco12g0685 589 SUPERFAMILY ALDH-like 104 583 IPR016161 GO:0016491
Acco12g0685 589 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 361 550 IPR016163 GO:0016620
Acco12g0685 589 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 123 579 IPR016162 GO:0016491
Acco12g0685 589 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 383 394 IPR016160 GO:0016491
Acco12g0685 589 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 355 362 IPR029510 GO:0016491
Acco12g0685 589 FunFam Mitochondrial aldehyde dehydrogenase 2 361 550 - -
Acco12g0685 589 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 93 579 - -
Acco12g0685 589 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 113 368 - -
Acco12g0685 589 FunFam Aldehyde dehydrogenase, putative 551 577 - -
Acco12g0685 589 Pfam Aldehyde dehydrogenase family 117 579 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0685 Acco-ChrAcco12 6333549 6338109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0685 58 589 Aldehyde Dehydrogenase Gene Family AT3G48000 77.341 0.0 885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0685 12 6333549 6338109 Acco12g0685 12 6333549 6338109 ECH