Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0675 ATGATGAAGGGAGGAGAAGGGAAGGAGTACAAGAAGGGACTGTGGACGGAGGAAGAAGACAAGGTTTTGATGGAATACATTGGGGTTCATGGAAGAACCCACTGGAACCGCATTTCCAAAGTCACTGGTTTAATGAGGAGTGGGAAGAGTTGCAGATTAAGGTGGTTGAACTATCTGAGTCCAAACGTCAAACATGGAAGTTTCTCTGAGGAAGAAGACGATCTCATCATTCGTCTTCATAATCTCCTTGGAAACAGGTGGTCTCTAATAGCAGGAAGGGTACCTGGAAGAACGGACAACCAAGTAAAAAATCATTGGAACACTCATTTGTGCAAGAAACTTGGTATCACTAAAAAAACTAAAAAACCTAGGAAAGACAAGGTATCAGCAAAACCCAGAGCTTTACAAGCAGAAAAAGCTCAAAATGTTGACATGTCTTCGAGTTCTATAGATATTATTCCTCTCACCCTCAACAACAAAGAAGACAAAGAAGCTGAGGTACAATTAGGTCAAAGGAACTATGTGAACAACAATCCCACAACAAACAATATTGATGAAATACAACATTGTTGGCCACCTACAGAATGGGATGATCATCACTTTGATCAAACTTTTATGTTTGATGATGGTCATACTTTTGTTCTACATAGTCCTCCTAGGTTAATGGAATTTTTGGATGGATTCGATGTAATTTAG 696 0.3951 MMKGGEGKEYKKGLWTEEEDKVLMEYIGVHGRTHWNRISKVTGLMRSGKSCRLRWLNYLSPNVKHGSFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCKKLGITKKTKKPRKDKVSAKPRALQAEKAQNVDMSSSSIDIIPLTLNNKEDKEAEVQLGQRNYVNNNPTTNNIDEIQHCWPPTEWDDHHFDQTFMFDDGHTFVLHSPPRLMEFLDGFDVI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0675 231 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Acco12g0675 231 Gene3D - 5 65 - -
Acco12g0675 231 FunFam Myb transcription factor 12 64 - -
Acco12g0675 231 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Acco12g0675 231 FunFam Transcription factor WER 66 139 - -
Acco12g0675 231 SMART sant 11 61 IPR001005 -
Acco12g0675 231 SMART sant 64 112 IPR001005 -
Acco12g0675 231 CDD SANT 67 110 IPR001005 -
Acco12g0675 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Acco12g0675 231 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Acco12g0675 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 59 IPR017930 -
Acco12g0675 231 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Acco12g0675 231 Pfam Myb-like DNA-binding domain 12 59 IPR001005 -
Acco12g0675 231 Gene3D - 67 142 - -
Acco12g0675 231 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 174 - -
Acco12g0675 231 CDD SANT 15 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0675 Acco-ChrAcco12 6228701 6232813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0675 1 116 MYB Transcription Factor Family AT5G40330 73.276 2.32e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco12g0675 Myb_DNA-binding 1e-13 CL0123