Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0670 ATGAATTCTAGCGATGAAACAAACGAGGATTCACCGTCTCCCGGAGGATCGCCTCCTCAAATGGCAAACATTAATTTGGAGAGCCTCTCGCAGAAAAATAAAAAGTCGGCACCAGAACCGGCACCGGCACCTCCAAAGTCGGAAAAGGGTTCGGATACCGACGATGCTCCGCCGCCGAAGTCTATTGATTCAATCTCATCATTGAAGACACCGCCATCGCCGTCTAAGGCTACTCTGATTCATCCAAGCTCACCATCACCTAAAGAATCACCTTCCAAGAAATCAACGCCAGCACCGCCACCGCCTCCTCCACCGGTAGCATCACCACCTCCTCCAATGACAACGCCGCCGCCGCTGCCGCCTCCATCAGTAAAGCAATCGCCTCATTCACCACCACCGCCTTTCCCTACACCACCTCCTCCCTCACTCTCGCAACCTTCTGCCTCTTCGCCTCCGGCGCCGCCACCACCGTTATCGAGTAATGGGGAAAATGTCTCTCCCGGCCCCACTGAACAGTTGGCATCATTATCAGATTCACAGGACCGGTCTTCTTCGAATATCTCTTCTAATAACTCACCACCACCACCACCTTCTGCTCCTATCATTTTATCCTCGATGACTCAAAGTGCCCCACCGCCGCCACAAACGCAGGTTGAAGGTTCCAGCCATTCTTCACCGCCGCACTCACCAGGGCTGAACGCTGGCTCAAATACAAGAACAAGGGGTTCTTCCAACGACTCCGTGCCGTCAACGTCAGGAGGTGACAGTAGCAGTAGTAGCGACAGTAATGCAGCAACATATGTGGGTATTGCATTCGCGGGAGTCTTTATCATTGTTTTAGTTGGTTTATGTTTTTTGGTGGCGAGAATGAGAAAGAGAAGACGCGGGGCTGTCCATGATGCATCACGTATACTGCCAAATATGAAAACATCAGGTGAAGATTGGCGTTACTACGGACTGCAGCCCCTGCAAGATGACCCCTACAGAAATGGGAGTCAAAGGGGAATTGTGCAACCTTTGGGAACTTCAGAGTCGGTGCAGCCCATGAGTGGTCAGATTGCTTTTAGCTATGAAAGTATTTGGGAGATAACAAATGGGTTTTCTAGTGAGAACATCATAGGAGAGGGGGGCTTTGGGTGTGTTTACAAGGGTTGGCTGGCAGATGGAAGAGTTGTAGCAGTCAAGAAGCTGAAGGCAGGCAGCGGGCAAGGCGACCGGGAATTCAGGGCAGAAGCGGAGATTATCAGCCGTGTTCATCATCGACATTTGGTATCGCTAGTCGGCTATTGCATATCTGAGCATCAGAAGATTCTTATGTATGAGTTTGTTCCCAATGGAACGCTCAATCATCACTTGCATGGAAAAGGAATGCTAGTGTTAGATTGGGACAAGAGGGTGAAGATAGCAATCGGTGCCGCCAGAGGCCTGGCATATCTGCACGAGGATTGCCAGCCAAAGATTATCCACAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTACGAGGCAAAGGTTGCCGACTTTGGACTTGCGAGGCTCACAGATGACGCTAATACTCATGTATCAACTCGCGTCATGGGGACCTTTGGGTACATGGCTCCCGAGTATGCAACAAGTGGAAAATTAACAGATAGGTCGGATGTTTTCTCCTTTGGAGTTGTCCTCCTAGAGCTTTTGACTGGAAGGAAACCAGTTGATCCAACTCAACCACTGGGAGAAGAGAGTTTGGTTGAGTGGGCTAGACCTCATCTCATTCATGCAGTTGAGACTGGTGACTTTAGCAAACTAATAGACACAAGGCTTGAAAATCGTTATGTGGAGAGTGCAGTACTTAGAATGATTGAAGCAGCTGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCCCGGATGCTGCAGGTTGTGAGAGCCTTAGATTGTGGAAGTGAACTAGTTGACCTATCCAATGGAGTGAAATATGGTCAGAGCACTGTTTATGATTCTGGACAGTATGATGAAGAACTTATGAGATTTAGGACGATGAATGGTGTAAGCTTTGGCAGTTCTAAATTTGATTTGAATGATGAAGAATACTGTTCAAGAGAATTATCCGGCTTTCAACGCGCATTTGCCCTGTATAGTTCAGGTGGCGAGTCCAGCCTTCTAGCCACCAGCAAAGGTGGGAGCAGTAGGCAAACGAAGGGATAA 2193 0.4879 MNSSDETNEDSPSPGGSPPQMANINLESLSQKNKKSAPEPAPAPPKSEKGSDTDDAPPPKSIDSISSLKTPPSPSKATLIHPSSPSPKESPSKKSTPAPPPPPPPVASPPPPMTTPPPLPPPSVKQSPHSPPPPFPTPPPPSLSQPSASSPPAPPPPLSSNGENVSPGPTEQLASLSDSQDRSSSNISSNNSPPPPPSAPIILSSMTQSAPPPPQTQVEGSSHSSPPHSPGLNAGSNTRTRGSSNDSVPSTSGGDSSSSSDSNAATYVGIAFAGVFIIVLVGLCFLVARMRKRRRGAVHDASRILPNMKTSGEDWRYYGLQPLQDDPYRNGSQRGIVQPLGTSESVQPMSGQIAFSYESIWEITNGFSSENIIGEGGFGCVYKGWLADGRVVAVKKLKAGSGQGDREFRAEAEIISRVHHRHLVSLVGYCISEHQKILMYEFVPNGTLNHHLHGKGMLVLDWDKRVKIAIGAARGLAYLHEDCQPKIIHRDIKSANILLDDAYEAKVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDPTQPLGEESLVEWARPHLIHAVETGDFSKLIDTRLENRYVESAVLRMIEAAAACVRHSAPKRPRMLQVVRALDCGSELVDLSNGVKYGQSTVYDSGQYDEELMRFRTMNGVSFGSSKFDLNDEEYCSRELSGFQRAFALYSSGGESSLLATSKGGSSRQTKG 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0670 730 MobiDBLite consensus disorder prediction 202 262 - -
Acco12g0670 730 CDD STKc_IRAK 373 641 - -
Acco12g0670 730 FunFam Proline-rich receptor-like protein kinase PERK8 341 442 - -
Acco12g0670 730 Gene3D Transferase(Phosphotransferase) domain 1 443 651 - -
Acco12g0670 730 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 277 677 IPR047117 -
Acco12g0670 730 MobiDBLite consensus disorder prediction 1 262 - -
Acco12g0670 730 SMART serkin_6 367 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0670 730 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Acco12g0670 730 MobiDBLite consensus disorder prediction 163 189 - -
Acco12g0670 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Acco12g0670 730 Pfam Protein tyrosine and serine/threonine kinase 370 640 IPR001245 GO:0004672|GO:0006468
Acco12g0670 730 Gene3D Phosphorylase Kinase; domain 1 338 442 - -
Acco12g0670 730 FunFam proline-rich receptor-like protein kinase PERK8 443 655 - -
Acco12g0670 730 MobiDBLite consensus disorder prediction 92 162 - -
Acco12g0670 730 PRINTS Proline rich extensin signature 72 88 - -
Acco12g0670 730 PRINTS Proline rich extensin signature 99 116 - -
Acco12g0670 730 PRINTS Proline rich extensin signature 38 59 - -
Acco12g0670 730 PRINTS Proline rich extensin signature 120 145 - -
Acco12g0670 730 SUPERFAMILY Protein kinase-like (PK-like) 343 640 IPR011009 -
Acco12g0670 730 ProSiteProfiles Protein kinase domain profile. 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0670 730 MobiDBLite consensus disorder prediction 63 91 - -
Acco12g0670 730 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0670 Acco-ChrAcco12 6188944 6193491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0670 221 676 Trihelix Transcription Factor Family AT1G70460 59.958 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Acco12g0670 PK_Tyr_Ser-Thr 7.6e-48 CL0016