Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0653 ATGCTTCCTCTCTCTACATCTCAGCTTCGTCCTCTGTCTTTCTCTCTAGCCATGTCAACACTAAACGAGCTTCATCTTCAAGAACGGTTATGTTACGTGCGATGTGGATTATGCAGCACCATGTTACTGGTGAGTGTTCCATGTCGTAGTTTATCAATGGAGGTGACTGTGAGGTGTGGAAACTGCACAAACCTTCTCTCTGTTAATATCATGAAAGCTTCTTCTGTCCCTTTTCAAATCTTTCCTTCTTTCCAGCTTACTTGTCTTAATCAGCCCAAAGAAGGAAGTCCAGAAGAAAATGCAGAAAAGACTAATTGTTCTGATAGTGGGGGAGATGATGCAATAATTCCAATGAGTCCTGCCATTAATGAACGCCCAGCTGGGAAAAGACACAAAACACCATCTGCTTATAATCGCTTCGTCAGAGAAGAGATCAGAAGGCTGAAGACTCAAAACCCAGACATGGTTCACAAGGAAGCCTTCAGAACAGCAGCCAAAAATTGGGCCAATTTCCCTCAAGCTCAATCTAAAGGAGATGAAGAGAGCTGTAGCCATGTGGACCCACATGAAGATGCTGAAGAGGAGGAGGTAAAATCATAG 600 0.435 MLPLSTSQLRPLSFSLAMSTLNELHLQERLCYVRCGLCSTMLLVSVPCRSLSMEVTVRCGNCTNLLSVNIMKASSVPFQIFPSFQLTCLNQPKEGSPEENAEKTNCSDSGGDDAIIPMSPAINERPAGKRHKTPSAYNRFVREEIRRLKTQNPDMVHKEAFRTAAKNWANFPQAQSKGDEESCSHVDPHEDAEEEEVKS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0653 199 MobiDBLite consensus disorder prediction 180 199 - -
Acco12g0653 199 PANTHER PROTEIN YABBY 6-RELATED 18 181 IPR006780 GO:0007275
Acco12g0653 199 Gene3D High mobility group box domain 121 198 IPR036910 -
Acco12g0653 199 MobiDBLite consensus disorder prediction 92 112 - -
Acco12g0653 199 MobiDBLite consensus disorder prediction 167 199 - -
Acco12g0653 199 Pfam YABBY protein 26 175 IPR006780 GO:0007275
Acco12g0653 199 SUPERFAMILY HMG-box 125 174 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0653 Acco-ChrAcco12 6043109 6044778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0653 19 177 C2C2-YABBY Transcription Factor Family AT1G23420 47.486 3.17e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco12g0653 YABBY 9.7e-49 CL0114