Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0646 ATGGCAACTACTGGTTTGGTTTTCTGGCTTCTGAGTTTGCTGCTTCTGGCGTCGATGGAGATTTCTTCTGCCACGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTCGCTCTGATGGCCATAAAAAGTGACTTGCATGATCCCCACAATGTCCTGGAAAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCAAGATGGCTCCGTCTCTTCTTTAGGATTGCCCAGTCAGAACTTGTCTGGCAAGCTTTCTCCGGGGATTGGAAATCTGAGTAACTTGCAATCTGTGTTACTTCAGAACAATGCCATTTCCGGCTCAATTCCCGCTGCCATCGGAAAGCTGGAAAAGCTTCAGACACTTGATCTTTCCAATAACACATTTAGCGGTGACATACCTAGTTCTCTGGGGAGTCTCAAAAATCTGCATTATCTGCGGTTGAATAATAACAGCCTTTCAGGATCCTGCCCTCAGTCTCTTGGCAACATTGAAGGTCTAACCCTTGTGGATCTCTCTTATAACAATCTGAGTGGTTCGTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGAAACTCTTTAATTTGTGGTCCAAATGCTAATAATAACTGCTCCAATGTTTTGCCGGAGCCACTCTCCTTCCCGCCAGATTCTTTAAGAGGCCAATCAGCATATGGGACGAAGAGTCATCGTGTTGCAGTTGCTTTTGGAGCAAGTTTTGGGGCTGCTTTTGTGATTGTGATTATTGCTGTATTTATTGTTTGGTTGCGGTACAGACACAACAAACAGATATTCTTTGATGTTAATGAGCAATACGACCCAGAGGTGCGCCTTGGCCATTTGAAAAGGTATACATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTTGGACGGGGTGGCTTTGGAATAGTCTACAAAGGGCGCTTCAATGATGGCTCTGTTGTGGCAGTGAAAAGGTTGAAGGACTATAATGCTGGTGGTGGTGAGATCCAATTTCAAACAGAAGTTGAGACCATAAGTTTGGCTGTTCACCGGAATCTCTTGAGACTTTGTGGGTTTTGCAGTACTGAAAATGAAAGGCTCCTTGTTTATCCATATATGCCTAATGGCAGTGTAGCCTCCCGATTAAAAGATCATATTCATGGTCGACCAGCCTTAGATTGGGTGAGGAGGAAAAGAATAGCTTTGGGTACGGCAAGAGGGTTAGTTTACTTGCACGAGCAGTGTGACCCTAAAATCATTCACCGTGATGTAAAAGCAGCCAACATATTGTTGGATGAAGACTTTGAAGCAGTTGTCGGTGATTTTGGTCTGGCAAAGCTTCTAGATCACAGAGAATCTCATGTAACTACTGCTGTGCGTGGCACTATTGGTCACATTGCTCCAGAGTATTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATATTACTGCTCGAGCTTATCACAGGTCATAAGGCTTTGGATTTTGGACGAGCAGCTAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTACATCAAGAAGGAAGATTGAGTCAAATGGTTGACAAAGATTTGAAGGGAAACTTTGATGCAGATGAACTGGAAGAAATGGTTCAGGTTGCACTGTTATGTACACAATTTAATCCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTGACTGAGAGGTGGGAGGAAGCTTCACAGAAGACTGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCTCAAAGATACTCCGATTTTATCGAAGAATCTTCACTCATACTTGAAGCTATGGAGCTTTCCGGCCCCAGGTGA 1881 0.4338 MATTGLVFWLLSLLLLASMEISSATLSPSGINYEVVALMAIKSDLHDPHNVLESWDINSVDPCSWRMITCTQDGSVSSLGLPSQNLSGKLSPGIGNLSNLQSVLLQNNAISGSIPAAIGKLEKLQTLDLSNNTFSGDIPSSLGSLKNLHYLRLNNNSLSGSCPQSLGNIEGLTLVDLSYNNLSGSLPRISARTFKIVGNSLICGPNANNNCSNVLPEPLSFPPDSLRGQSAYGTKSHRVAVAFGASFGAAFVIVIIAVFIVWLRYRHNKQIFFDVNEQYDPEVRLGHLKRYTFKELRAATDHFNSKNILGRGGFGIVYKGRFNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLKDHIHGRPALDWVRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGRLSQMVDKDLKGNFDADELEEMVQVALLCTQFNPLHRPKMSEVLKMLEGDGLTERWEEASQKTETRFRSFENPPQRYSDFIEESSLILEAMELSGPR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0646 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 587 - -
Acco12g0646 626 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Acco12g0646 626 FunFam Somatic embryogenesis receptor-like kinase 1 380 596 - -
Acco12g0646 626 FunFam Somatic embryogenesis receptor kinase 1 272 379 - -
Acco12g0646 626 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Acco12g0646 626 ProSiteProfiles Protein kinase domain profile. 303 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0646 626 Gene3D Phosphorylase Kinase; domain 1 272 379 - -
Acco12g0646 626 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Acco12g0646 626 Gene3D Transferase(Phosphotransferase) domain 1 380 596 - -
Acco12g0646 626 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 213 - -
Acco12g0646 626 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Acco12g0646 626 Pfam Protein kinase domain 304 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0646 626 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0646 626 SUPERFAMILY L domain-like 32 199 - -
Acco12g0646 626 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Acco12g0646 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0646 Acco-ChrAcco12 5943422 5947708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0646 67 626 Receptor kinase-like Gene Family AT1G60800 75.571 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Acco12g0646 Pkinase 2.1e-43 CL0016