Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0641 ATGCTAACGTCAATATATGAACTATCATGCGGAATTGTGGACCAACAAGCCGGGTGTTGCTGCGTTAAAGCCTTGTCCTTCACTTCCCACAAAATCAATTTCTCAACTTTACTGCCTCATTTAGAATTCACATTTCTGTCAAACAGAAACTTCAACTCCGTTCAGGAGCTCAATACAAAGCACATCTTGCTAAGCAGGCATGGCCTTGTTTCTTGTTGGGCAGCCCAGAAATCTGTATCAGAGAACATGAAGAAATCAGTCCAGTTAGTCTCGTGTCAATCTCTTATTCTTCTTCTAATCAGATCATTACTACCACTGCTTATGCTACCAGAAACAGTAATGGCAGATCCAAGAATCAAGACAGTGCAAATAAAGTGTGGGAGCCAATCAGAGCACAATACCACAAAGTTTGTCGCAAATTTTGTTACAAACATGGAAGATATCAGTGATCAGATGCGCAATAATGGGTATGGCACAGCAGTTTCAGGGACAGGTCCTGATACTAACTATGGCCTTGCTCAGTGCTATGGAGATCTTTCTTTACTTGACTGTGTTCTATGTTATGCCGAGGCAAGAACAGTTCTTCCCAAGTGTTTTCCCAGCAATAGTGGTCGCATACACCTTGATGGTTGCTTTATGAGGGCTGAGAATTACAGCTTCTTTGATGAGTACAAAGGAGCAGAAGACAGGGCTGTGTGTGGAAACACAACTGGAAAAAGCTCGAGTTTTCAGGCGACAGTGAGGCGGGCGGTTCTGAGTGCAGTTGAAGCTGCAACAAATAATAAAGGGTATGCCAGGGAGAGTGTTGCTGTATCAGGAACAACAAATGAGTCAGCTCATGTTTTGGCTAATTGTTGGAGAAGTTTGAACACAAGCTCTTGTAAAGCCTGCCTTGAAGATGCATCTTCGTCTATATTGGGATGCTTGCCCTCCTCAGAAGGAAGAGCTCCCAACACTGGCTGCTTCATGAGGTATTCAGACGAAGATTTTCTGAACCATGAACTGGAAAGTGGAAGTTCATCAGGTAATCTGATAGTTCTATTGGTTGCAATTGTCAGTTCAGTTATTGTTTTTGTGGTTGCGATAGCCATTGGGGTTTATGTCTGGAAGCAGAGATACATTCAAATGAAACGAAGAGAAGGTTCAAATGATGTGGAGAAGTTAGCGAAGACCCTTCACCACAACAGCTTGAACTTCAAGTACTCTACCCTGGAGAGGGCAACTGACTCTTTTGATGTTGCGAACAAGCTTGGACAAGGAGGGTTTGGGACAGTTTATAAAGGAATTTTGCCTGATGGAAGAGAGATTGCAGTAAAGAGGTTATATTTTAACAACAGACATAGAGCAGAAGATTTCTATAATGAAGTCAACATAATCAGCGGTGTGGAACATAAAAATCTAGTCAGATTGTTAGGATGCAGTTGTTCAGGACCTGAAAGCCTTCTTGTATATGAGTATCTACCCAACAAGAGTCTTGATCGTTTCATTTTTGATAAAAACAGAGGAAAGGAACTAAACTGGGATAGGAGATACGAAATTATCATTGGGACCGCAGAAGCATTAGTCTACCTGCATGAGAAGTCCAAGATTAAGATAATTCACAGAGATATAAAAGCCAGCAATATCTTATTGGACACAAGGCTTCGAGCTAAAATTGCAGATTTTGGTTTGGCTAGGTCTTTCCAAGAAGACAAAAGCCACATCAGTACAGCTATTGCAGGAACTTTAGGGTATATGGCCCCAGAGTACCTAGCTCATGGTCAGTTAACAGAGAAAGCAGATGTATATAGTTTTGGAGTGTTACTACTGGAAATAGTTACCGGAAGACTGAACAACAGAAGCAAAGCATTAGAATATTCAGACAGCCTAATCACAGTGACATGGAAGCATTTCCAGGCAGGGACTACAGAACAACTATTCGATCCGAATCTAACATCACAGGAAAACCACAATAACAATGTCAAAGATGAAATTTTAAGAGTGGTGCACATAGGACTTCTATGCACTCAAGAGATCCCTTCATTACGACCAACAATGGCAAAAGCATTAGAGATGCTAACTAAGAAGGAGGAGCAACTACCTGCTCCCTCTAATCCACCCTTCCTAGATGAAAACACAATGGAACTCCAAGACAAATATGATGATCCACTCTATCCTCTTAATGCAGCTGATTCAATTGCTACTATGTCTTACAGCGAATTTTATCCCAGGTGA 2214 0.4151 MLTSIYELSCGIVDQQAGCCCVKALSFTSHKINFSTLLPHLEFTFLSNRNFNSVQELNTKHILLSRHGLVSCWAAQKSVSENMKKSVQLVSCQSLILLLIRSLLPLLMLPETVMADPRIKTVQIKCGSQSEHNTTKFVANFVTNMEDISDQMRNNGYGTAVSGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPSNSGRIHLDGCFMRAENYSFFDEYKGAEDRAVCGNTTGKSSSFQATVRRAVLSAVEAATNNKGYARESVAVSGTTNESAHVLANCWRSLNTSSCKACLEDASSSILGCLPSSEGRAPNTGCFMRYSDEDFLNHELESGSSSGNLIVLLVAIVSSVIVFVVAIAIGVYVWKQRYIQMKRREGSNDVEKLAKTLHHNSLNFKYSTLERATDSFDVANKLGQGGFGTVYKGILPDGREIAVKRLYFNNRHRAEDFYNEVNIISGVEHKNLVRLLGCSCSGPESLLVYEYLPNKSLDRFIFDKNRGKELNWDRRYEIIIGTAEALVYLHEKSKIKIIHRDIKASNILLDTRLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRLNNRSKALEYSDSLITVTWKHFQAGTTEQLFDPNLTSQENHNNNVKDEILRVVHIGLLCTQEIPSLRPTMAKALEMLTKKEEQLPAPSNPPFLDENTMELQDKYDDPLYPLNAADSIATMSYSEFYPR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0641 737 FunFam Cysteine-rich receptor-like protein kinase 3 229 330 - -
Acco12g0641 737 Pfam Protein kinase domain 413 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0641 737 FunFam Cysteine-rich receptor-like protein kinase 2 119 220 - -
Acco12g0641 737 FunFam Putative DUF26-domain receptor-like protein kinase family protein 376 486 - -
Acco12g0641 737 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 170 708 - -
Acco12g0641 737 CDD STKc_IRAK 417 688 - -
Acco12g0641 737 FunFam Cysteine-rich receptor-like protein kinase 2 487 694 - -
Acco12g0641 737 Pfam Salt stress response/antifungal 237 327 IPR002902 -
Acco12g0641 737 Pfam Salt stress response/antifungal 126 218 IPR002902 -
Acco12g0641 737 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Acco12g0641 737 Gene3D Transferase(Phosphotransferase) domain 1 487 698 - -
Acco12g0641 737 ProSiteProfiles Protein kinase domain profile. 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0641 737 ProSiteProfiles Gnk2-homologous domain profile. 225 330 IPR002902 -
Acco12g0641 737 SMART serkin_6 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0641 737 Gene3D Phosphorylase Kinase; domain 1 371 486 - -
Acco12g0641 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Acco12g0641 737 SUPERFAMILY Protein kinase-like (PK-like) 395 707 IPR011009 -
Acco12g0641 737 ProSiteProfiles Gnk2-homologous domain profile. 119 220 IPR002902 -
Acco12g0641 737 Gene3D - 230 330 IPR038408 -
Acco12g0641 737 Gene3D - 119 220 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0641 Acco-ChrAcco12 5860014 5865370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0641 95 737 Receptor kinase-like Gene Family AT1G70520 65.426 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco12g0641 Pkinase 1.2e-46 CL0016