Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0640 ATGTCTGGAACCACCCTTCTGCTTCTTCTCCTTTTTCCCTTCGCAATTCCTTCTCTTTCTGATCCAAGAGCTTCAGAAATAGCTCTTATGTGTACAAACAAAACCACACCATTTTCCCAACGCAATATCTTCACAGCCAATTTCTTAGCTGCTTTAGACGCCTTAACCCCTTCAATCGCTAGGTACAGATACGCCTCTGTTATTATTAACAGAACTGGAAATTCCATTGTTTATGCTTTTGCACAGTGCATGGACGATCTTACTGAATGGGATTGCAATATCTGCTTCGCTCAGATCAAGGCTCAAATGCCAAGATGTTTACCATTTCAGAGAGGGACCCGTGGGGGAAGGGCATTTTTTGATGGGTGTTATCTCCGGTACGATGATTACAATTTCTTAAATGAAAGTCTCAGTGATCAAGACAGAACTGTGTGTGGAAACAAAGATTTTGGTGGGAATCAGAGTGTATATGAGGCTAATACAATGGAGTTATTGAGGAATTTGAGTGTGGAAGCACCAAAGAATGATAGGTTCTTTGTGGGTTTTGTGAAAAGAAGTAATGTGACTGTTTATGGTTTGGCTCAGTGCTGGGAATTTGTTAATGGAAGTTCTTGTGAGAGGTGTTTGGCAGAAGCTGTTAAGAATATTAGTTCTTGTACTCCAAAAGAAGAAGGAAGAGTTTTGAATTCTGGATGTTATATGAGGTATTCAACCCAAAAGTTCTATGACAACATAACCAGCCCCCTTAATGGAAATGTAGGGAACAACAGCAGTTCAGTCATACTGCTGGCTGCTGCATCAAGTGCTGGATTAGCTCTTGTACTGGTTGTTGCAGTAGTTGCTTTCTTTGCAAGGAAGAGGATACTGAGAAAGAAGAGAGAAAGAAGACAGTTTGGTGTACTTTTGGACAGAGTTTACAAGTCCAAGCTCAATATGACATATGAAGTCCTTGAAAGGGCCACAAATTACTTCAACGCCTCCAATAAGCTTGGACAAGGAGGTTCAGGTTCTGTTTATAAAGGAGTTCTGCCTGATGGGAATATTGTTGCTATAAAAAGGCTTAGTTTTCACACGACACAATGGGCAGATCATTTCTTCAATGAGGTCAATCTGATAAGTGGCATTCATCATAAAAATCTTGTGAGGCTTCTGGGTTGCAGCATTACAGGACCCGAAAGCCTTCTTGTTTACGAATATGTGCCAAACCAAAGCCTCCATGATCACTTTTCTGTGAAGCAAAAATCTCAGCCCTTGACTTGGGAAGCGAGGCAAAAGATCATATTGGGAACTGCGGAGGGATTGGCCTATCTTCATGAGGAATCACCAGTGAGAATCATTCACAGAGATATTAAATTAAGCAACATTCTGCTTGAAAAGGATTTCACACCCAAGATAGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGATGGGACTCACATTAGTACTACTGTTGCGGGCACACTTGGTTATATGGCTCCTGAATACGTCGTTCAAGGAAAATTATCAGATAAAGCAGATATTTACAGTTTTGGGGTTCTTCTTATCGAACTCATATCCGGAAAGAGGAGTAGTTCTTTTGTTCTAAATGCGACCTCAATCTTACAAATGGCTTGGAATCTTCATCAGTCAGGCAGGCTATGTGACATGGTAGATCCGAGGCTTGAAGGCAATTATCCGGCCAAGGAAGCATGCCGGTTACTTGAGATAGGGTTGCTTTGTGCACAAGCATCGGCAAATCTACGACCATCAATGTCAGAAGTTTTGAGAATGATAAGTAGCAATGAGGAAATTCCTGAGCCAACACAACCACCATTTTTGGTAGCAAGCAGTGTAGAATGCAGCAAATCTGAGTATAATTTTCAGATTTCATCCAAAACACATTCTTCAGAGGATACTATGACTGAAAGCCTTATTCCTCCAAGATGA 1929 0.4101 MSGTTLLLLLLFPFAIPSLSDPRASEIALMCTNKTTPFSQRNIFTANFLAALDALTPSIARYRYASVIINRTGNSIVYAFAQCMDDLTEWDCNICFAQIKAQMPRCLPFQRGTRGGRAFFDGCYLRYDDYNFLNESLSDQDRTVCGNKDFGGNQSVYEANTMELLRNLSVEAPKNDRFFVGFVKRSNVTVYGLAQCWEFVNGSSCERCLAEAVKNISSCTPKEEGRVLNSGCYMRYSTQKFYDNITSPLNGNVGNNSSSVILLAAASSAGLALVLVVAVVAFFARKRILRKKRERRQFGVLLDRVYKSKLNMTYEVLERATNYFNASNKLGQGGSGSVYKGVLPDGNIVAIKRLSFHTTQWADHFFNEVNLISGIHHKNLVRLLGCSITGPESLLVYEYVPNQSLHDHFSVKQKSQPLTWEARQKIILGTAEGLAYLHEESPVRIIHRDIKLSNILLEKDFTPKIADFGLARLFPEDGTHISTTVAGTLGYMAPEYVVQGKLSDKADIYSFGVLLIELISGKRSSSFVLNATSILQMAWNLHQSGRLCDMVDPRLEGNYPAKEACRLLEIGLLCAQASANLRPSMSEVLRMISSNEEIPEPTQPPFLVASSVECSKSEYNFQISSKTHSSEDTMTESLIPPR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0640 642 CDD STKc_IRAK 330 592 - -
Acco12g0640 642 SMART serkin_6 324 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0640 642 Pfam Salt stress response/antifungal 31 130 IPR002902 -
Acco12g0640 642 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Acco12g0640 642 ProSiteProfiles Protein kinase domain profile. 324 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0640 642 Gene3D Phosphorylase Kinase; domain 1 285 399 - -
Acco12g0640 642 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Acco12g0640 642 FunFam Cysteine-rich receptor-like protein kinase 2 290 399 - -
Acco12g0640 642 Gene3D - 140 241 IPR038408 -
Acco12g0640 642 Gene3D - 24 132 IPR038408 -
Acco12g0640 642 FunFam Cysteine-rich receptor-like protein kinase 3 141 241 - -
Acco12g0640 642 Gene3D Transferase(Phosphotransferase) domain 1 400 602 - -
Acco12g0640 642 SUPERFAMILY Protein kinase-like (PK-like) 309 614 IPR011009 -
Acco12g0640 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Acco12g0640 642 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 627 - -
Acco12g0640 642 ProSiteProfiles Gnk2-homologous domain profile. 25 132 IPR002902 -
Acco12g0640 642 FunFam Cysteine-rich receptor-like protein kinase 2 400 600 - -
Acco12g0640 642 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Acco12g0640 642 Pfam Protein kinase domain 325 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0640 Acco-ChrAcco12 5855763 5858697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0640 17 489 Receptor kinase-like Gene Family AT1G70530 62.105 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco12g0640 Pkinase 1e-48 CL0016