Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0631 ATGTTTAGTGTTATAAATAAAACGACCTTCTTTTCCGAGCTAGCAGAAAGCTTCATGACCACCACAACCATGGCTTCCTTTAACCTCCTTCCTTCTCTAACTCATCTCTCTATGCTGGCCACTTTATTTGTTACATTTTTTTCCTCTCAAATTTCCATCAAAGCATCTATGGTTCCTTTTAAATGCTCTTCAAAAATCAACACATGTAATGCCCTACTTTACCACATAAACCACGGTCTTGACATAGAGCACATAGCCTCTCTTTACTCTGTTAACTCATCCCAAATCCAACCAATAACACGGGCCACCAACCGCGACTACCTCATAACTGTTCCTTGTTCTTGTAAAATCGTCACTAACCTTGGGGGATATTTCTTTGAGACAACATACACAGTGAAGCAAAATGATACATTTGTGGCTATTTCAAAGTTTTATTACAGTGGACAAGCCTGGTCTCCTACTGATAATTTGATCATCGGCGAAAACTTAACAATACATCTTCCCTGTGGGTGTACAGAAAGTGATTATCAAATTGTTGTGACATATACAGTCCAGCAGAATGATACAGTAGAAGAAATAGCTAATCTGTTATCATCTACACCTACTGGCATTCAGAACATGAATGGAATTTTAGCTAACAGGCTTTCATTCATAGAGGTGGATTGGGTTTTATATGTTCCTAGGGAGCTCAATGGGATTCCATCTTCAAAAGGAAGCGGAAAGAAACTCAAGCATTTTATTATTATTGGTGTCTTAGTGGGTGTGGCATTACTTTCTGTTATCACAATACTCACTCTTATTCTGTGGAGAAAAAGAGCCACTGAAACCAGCAAAGAAGATACAAAAGCTGTATCAAAAAGATCAGCTTCAAGAGCATTCTCTAAAAGATCAATTTCTAATAGGACTGATCTTTCCTCAAAGAACCATCAATTTCATATGGAAACTATAGAAGAAGTAACATCAATTGACTCAGAAAGACCAGTAACGTTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAAGTAAAATAATAGGAAAGGGTGGATATGGGACTGTGTATTTTGGAATTTTAGGAGACAAGGAGGTTGCCATAAAAGAGATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAATTGAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGTTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGATCTCTCAGTGACCATGTTCACAATCCATTTCAAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTTCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCACGGCACGTGCACCGAGATATCAAGACTAGCAATATTCTTCTTGATAACAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGGTAGAACGAACAAATGATGATGATTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCCCCAGAATCTGTGAAGGAGCTTCAGGTGACCTCAAAAACCGACGTTTTCGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTGTTTCGTGACAGCCAAGAAACCCCCAAAGTCAGATCGCTTATTTCTGTTATTAATAAAGTATTTGAAGATGATGATCCAGAGAGTGCTTTGGAGGATATCATAGACAAAAACCTTCGTGATATCTATCCGGTGGAGGATGTCTTCAAGGTTATAGAAATAGCTGAAAGATGCTTACGTGAAGAACCGATAGAGAGGCCAGAAATGAGGGAGATTGTGGTGACACTGTCACAGATTTTGATATCTTCCACAGAGTGGGAAGCATCACTAGGTGGAAACAGTGAAGTTTTTAGCGGCGTATTTACTGGAAGATGA 1935 0.3912 MFSVINKTTFFSELAESFMTTTTMASFNLLPSLTHLSMLATLFVTFFSSQISIKASMVPFKCSSKINTCNALLYHINHGLDIEHIASLYSVNSSQIQPITRATNRDYLITVPCSCKIVTNLGGYFFETTYTVKQNDTFVAISKFYYSGQAWSPTDNLIIGENLTIHLPCGCTESDYQIVVTYTVQQNDTVEEIANLLSSTPTGIQNMNGILANRLSFIEVDWVLYVPRELNGIPSSKGSGKKLKHFIIIGVLVGVALLSVITILTLILWRKRATETSKEDTKAVSKRSASRAFSKRSISNRTDLSSKNHQFHMETIEEVTSIDSERPVTFYLEEIEEAINKESKIIGKGGYGTVYFGILGDKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHVHNPFQKGHEPLSWTARAQISLDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLVERTNDDDFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLAELVTGKPALFRDSQETPKVRSLISVINKVFEDDDPESALEDIIDKNLRDIYPVEDVFKVIEIAERCLREEPIERPEMREIVVTLSQILISSTEWEASLGGNSEVFSGVFTGR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0631 644 SUPERFAMILY Protein kinase-like (PK-like) 329 616 IPR011009 -
Acco12g0631 644 SUPERFAMILY LysM domain 180 227 IPR036779 -
Acco12g0631 644 ProSiteProfiles Protein kinase domain profile. 340 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0631 644 Pfam LysM domain 182 227 IPR018392 -
Acco12g0631 644 ProSitePatterns Protein kinases ATP-binding region signature. 346 367 IPR017441 GO:0005524
Acco12g0631 644 FunFam PTI1-like tyrosine-protein kinase 3 412 630 - -
Acco12g0631 644 Pfam Protein kinase domain 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0631 644 SMART serkin_6 340 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0631 644 Gene3D Phosphorylase Kinase; domain 1 311 411 - -
Acco12g0631 644 Gene3D Transferase(Phosphotransferase) domain 1 412 631 - -
Acco12g0631 644 ProSiteProfiles LysM domain profile. 180 226 IPR018392 -
Acco12g0631 644 Gene3D LysM domain 179 227 IPR036779 -
Acco12g0631 644 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 45 640 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0631 Acco-ChrAcco12 5745156 5750413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0631 59 644 Receptor kinase-like Gene Family AT1G51940 38.208 5.17e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco12g0631 Pkinase 3.2e-50 CL0016