Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0605 ATGGATTTTGAGGATCAAGAGGAGCAAGAAGAAGAGATCGGCATGGAGTCATTGGGGATATCTCCGAGAGTGAAAATGCCGATGACCTCCGCCGGTGGTGCCGGAGAAGCTATGGTATTGCCTCAACCCACAAGGAGTTATTATAACAGTAATAATAACAGCAAGGGAAGATATAGAGAGTGCTTGAAGAACCACGCGGTGGGTCTCGGCGGACACGCGCTTGACGGTTGTGGTGAGTTCATGCCGGCCGGAGCTGAAGGCACACTCGACGCTCTCAAATGCGCCGCCTGTAACTGCCACCGCAATTTCCACCGTAAAGAGACCGAACCATTCTTGTTGAACCCCCATTACCACCAGCAGCAGCAACCGCCGCCGCCGCAGTTCGCGGCGGCATATTATCGAGCTCCGGCAGGGTACTTACATGTGGCAGGGCAGCACAGGGTAGGGCAGGGGACCCTGGCGCTGCCATCCACGTCAGGAGGAGGTGGCGGGACACAGAGCACGAGAGACGATCAGGACGACGACGTTTCAAACCCAAGCGGCGGCGGCGTCGGAGGGTCGTCGTCGGCGAAGAAGAGGTTCAGGACGAAGTTCACGCAGGAACAGAAGGATAAAATGCTGGAACTTGCTGAGAGATTGGGATGGAGGATTCAGAAGCAAGATGAAGAATTGGTGCAGCAATTCTGTAACGAAATGGGAGTGAAGCGTCAGGTTCTTAAGGTTTGGATGCACAACAACAAGCACACTGTGGGTAAGAAGCCCTAG 765 0.5464 MDFEDQEEQEEEIGMESLGISPRVKMPMTSAGGAGEAMVLPQPTRSYYNSNNNSKGRYRECLKNHAVGLGGHALDGCGEFMPAGAEGTLDALKCAACNCHRNFHRKETEPFLLNPHYHQQQQPPPPQFAAAYYRAPAGYLHVAGQHRVGQGTLALPSTSGGGGGTQSTRDDQDDDVSNPSGGGVGGSSSAKKRFRTKFTQEQKDKMLELAERLGWRIQKQDEELVQQFCNEMGVKRQVLKVWMHNNKHTVGKKP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0605 254 MobiDBLite consensus disorder prediction 151 195 - -
Acco12g0605 254 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 107 IPR006456 -
Acco12g0605 254 NCBIfam homeobox domain, ZF-HD class 191 247 IPR006455 -
Acco12g0605 254 Pfam ZF-HD protein dimerisation region 57 108 IPR006456 -
Acco12g0605 254 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 57 107 IPR006456 -
Acco12g0605 254 FunFam Zinc-finger homeodomain protein 2 184 252 - -
Acco12g0605 254 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 249 - -
Acco12g0605 254 Gene3D - 176 251 - -
Acco12g0605 254 SUPERFAMILY Homeodomain-like 176 252 IPR009057 -
Acco12g0605 254 MobiDBLite consensus disorder prediction 151 167 - -
Acco12g0605 254 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0605 Acco-ChrAcco12 5455601 5456365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0605 1 250 ZF-HD Transcription Factor Family AT4G24660 48.000 7.79e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Acco12g0605 ZF-HD_dimer 3e-29 No_clan