Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0603 ATGGCAGATAGCTTTGACTGGACGACGTCGTCCCTTCTTTGTTCGCAGGACAGTATTACTTGCCTTGCTGATTTCGAACGTGATGCTACAGATGATTTTGAAATTTCCCGTTATTTGAACCACCAGAACACTGGTTCGAACTGGGGTGGGTTCGAGTCCGTATTGGGTTTTCCCTTACAGAGTGAAGAAACTTTGAGATTATTGGCTGAGAAGGAGAGAGTTTATATGCCCAGGGAAGATTACCTTGTGAGATTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTGGAAGGTTCACGACTATTATGGTTTTGGACCATTGACCTTTTGTTTATCCACCAACTACTTTGATCGATTCCTATCGATGCATGATTTTAATAGAAGGCAAAAATGGACTGGGCAATTGTTAGCCGTGGCTTGTTTGTCAATAGCAACCAAAGTGGAGGAAAACGAAATGCCTCAATTGAAAGAACTTCAGGTTGAACAACCGAAGTTTGTATTTGAAGCCAGAAGCATTCACAGAATGGAGCTATTGGTACTGAGCACATTGCAATGGAAAATGCATGCCTTCACTCCTTGTTCCTTCATAGACTACTTCCTCACTAAAATCCCTTACCACCAACATACAGACACACTAAAGTCATCCATTTCTAGATCAATAAAGCTCATACTTAGTATAATCAAAGGTGTTGATTTCTTGGAATTCAAGCCTTCTGAGATAGCTGCTGCAGTGGCCATTTCTGTTTCAAGAGAACTGCAAATAACTGAGATTGATAAGGCTATAGCTTGTTTTGTGATTGTGCAAAAGGAGAGAGTCCTGAAGTGTGTTGAACTGATCAGAGATTTGTTTTTGGTTGGTGTTCCTTCTTCTTCTAATTTAGGGAGAAACTCAGGGTTATTTTTACCTCAAAGTCCTATGGGGGAGTTGGATGCTGCAAATTTGAGCTATAAAAGCGAGAAACCATCAAATGGATCATGTCCAAATTCTTCTTCACCTGATGGTCCAAATACCATAAGCAACAAATCAGAAAAACCTGATGAAGACACTACCAAGTCATAG 1080 0.4093 MADSFDWTTSSLLCSQDSITCLADFERDATDDFEISRYLNHQNTGSNWGGFESVLGFPLQSEETLRLLAEKERVYMPREDYLVRLRSGDLDLSVRREALDWIWKVHDYYGFGPLTFCLSTNYFDRFLSMHDFNRRQKWTGQLLAVACLSIATKVEENEMPQLKELQVEQPKFVFEARSIHRMELLVLSTLQWKMHAFTPCSFIDYFLTKIPYHQHTDTLKSSISRSIKLILSIIKGVDFLEFKPSEIAAAVAISVSRELQITEIDKAIACFVIVQKERVLKCVELIRDLFLVGVPSSSNLGRNSGLFLPQSPMGELDAANLSYKSEKPSNGSCPNSSSPDGPNTISNKSEKPDEDTTKS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0603 359 FunFam D6-type cyclin 191 284 - -
Acco12g0603 359 Gene3D - 67 285 - -
Acco12g0603 359 SUPERFAMILY Cyclin-like 55 195 IPR036915 -
Acco12g0603 359 PANTHER CYCLINS 66 287 IPR039361 -
Acco12g0603 359 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Acco12g0603 359 SUPERFAMILY Cyclin-like 179 291 IPR036915 -
Acco12g0603 359 SMART cyclin_7 100 188 IPR013763 -
Acco12g0603 359 MobiDBLite consensus disorder prediction 323 346 - -
Acco12g0603 359 Pfam Cyclin, C-terminal domain 198 290 IPR004367 -
Acco12g0603 359 Gene3D - 78 195 - -
Acco12g0603 359 Pfam Cyclin, N-terminal domain 66 194 IPR006671 -
Acco12g0603 359 MobiDBLite consensus disorder prediction 318 359 - -
Acco12g0603 359 CDD CYCLIN_AtCycD-like_rpt2 198 286 - -
Acco12g0603 359 SMART Cyclin_C_2 197 336 IPR004367 -
Acco12g0603 359 FunFam D6-type cyclin 78 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0603 Acco-ChrAcco12 5434913 5436875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0603 60 267 Core Cell Cycle Gene Families AT5G65420 56.398 1.06e-79 243