Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0592 ATGTCAACTAGCATAATCTTCGCTGTTGCTGGTTGGGAGGGTGTAATGGAATTCTTGGCGTGTATTTTGGCTGATTCATCAAATTCCACTTCCCTCGTAAAACAGTCTCCCAATCTTCCTACTGCAAATTTGCATTACCTTGCTCTTTGCCTCTTTTCATCTCTGTATATGCAATCTGTTACAGTAAAATTCAAATTCAACTCAATGGTCTTCCTTCGGCAGGGCATGCATTTTCAAAATTACTATAACTCGGAAGCATACAAGTTAAGAGGCAGCTTTTCTCGAGGAACTATCTTGGAGACATACAGAAAGTCGTTCTTAAAACCAAAATCGAAGGCAGAGATCAAATCACTTGCTGCTAAAAAACACAGTGAAGCAGAGAAGAGACGGAGGATGCGAATCAATACTCAATATGCCAACCTTCGCACCATCCTCCTCCCCAACTTGGCCAAAATGGACAAGGCATCAGTGCTGGCGGAGACTATAAGGAAAGTAAAGGAGCTGAAGAAGAATATATCAGAATTGGAAGCAGCTAGTGCGAGCAGTTCAGGTGAGATCACTGTGTTTCCCAGTGCAGTAGACAAGTTGAACTTGGAACACTGTAAAGATAAGGAGGGCGTCGTTAAGGCGACCCTGAGTTGTGAGGATAGGCCAGAGTTGATGTTAGACATCACAAAGGCTCTTAGGTCTGTGAAAGCAGAGATAGTGAAGGCTGAGATGGTGAATGTAGGACGGAGAACCAGAAATGTGTTATGGGTCCAAGGGTTGGAAAATGGAAATGAAGGGACGGTTGTCCTAAAGAGGATTCTGAAGGTTGCCATGCACAAGCCAACTTTCAAAATGCATCGTCTAATTCAGTAG 861 0.4344 MSTSIIFAVAGWEGVMEFLACILADSSNSTSLVKQSPNLPTANLHYLALCLFSSLYMQSVTVKFKFNSMVFLRQGMHFQNYYNSEAYKLRGSFSRGTILETYRKSFLKPKSKAEIKSLAAKKHSEAEKRRRMRINTQYANLRTILLPNLAKMDKASVLAETIRKVKELKKNISELEAASASSSGEITVFPSAVDKLNLEHCKDKEGVVKATLSCEDRPELMLDITKALRSVKAEIVKAEMVNVGRRTRNVLWVQGLENGNEGTVVLKRILKVAMHKPTFKMHRLIQ 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0592 286 PANTHER TRANSCRIPTION FACTOR BHLH30 97 277 IPR045847 GO:0003700|GO:0006355
Acco12g0592 286 Pfam Helix-loop-helix DNA-binding domain 122 168 IPR011598 GO:0046983
Acco12g0592 286 SUPERFAMILY ACT-like 210 258 IPR045865 -
Acco12g0592 286 Gene3D - 116 187 IPR036638 GO:0046983
Acco12g0592 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 181 IPR036638 GO:0046983
Acco12g0592 286 CDD ACT_UUR-ACR-like 211 269 - -
Acco12g0592 286 Coils Coil 158 185 - -
Acco12g0592 286 SMART finulus 124 174 IPR011598 GO:0046983
Acco12g0592 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 118 168 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0592 Acco-ChrAcco12 5341533 5343882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0592 114 253 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 45.205 1.98e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco12g0592 HLH 7.4e-09 No_clan