Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0582 ATGGCTCTTCCCGGTTCTCTGCAGCTGTCCTATGATTCCGGACATTGCAGGAACCTGGGCTGTTATAACCAACATATGGTCCTCAAGCGGGATTGCTGGAGAACTAAACTCTTTTGCAATATAAATAGGCCAATACATACCTTATTTTGCAAATCTCATTCTTTTCTAGGATCAGGCCCATCTAGTGAGCTACCTATTTCTAAGGTGGCAGCTACGGCACTAGCAAGGTCTTATAATCTATTACAATGTAGTCCTGTCACAGTAAAATTGATTCCAGCCATCGGCCTTATCATTTTGGCAGTAAGGGGTGTTGGCCCATTAATATATCACACAAGAAAACTGCTTCTCCAGAGGAGCGACAATAGTTGGAAGAAAAGTAGCACACATTATGTAGTAACTTCTTACATTCAGCCTTTACTATTATGGACTGGAGCTTTACTTATTTGCAGAGCTTTTGACCCATTAAATCTACCTTCAGAAGCAGCTCAAGCTGTCAAGGAACGGCTTTTGAGTTTTGTAAGATCATTGTCAACTGTACTTGCCTTCGCCTATTGTATATCACGTGTAATTCAACAAGCACAGAAATTCTTCACGGAGAGTGCTGCTAATTCCTGTGAGACAAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTATTCTGCAGTATGGATTGCTGCCTTCTCTTTGTTTATGGAGTTGCTGGGCTTTTCTACCCAGAGGTGGGTTACCGCAGGAGGTCTCGGGACTGTTTTGTTTACTCTTGCTGGTCGTGAGATATTTATGAACTTCCTTTCGAGTGTGATAATTCATGCAACTCGGCCTTTTGTGCTGAATGAATGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACTGTGGAGCATGTTGGCTGGTGGTCACCAACAATTATACGTGGTGAAAATCGTGAAGCTCTTTACATTCCAAACCACAAGTTCACAATGAGTGTTGTGCGAAACCTAAGTCAGAAAACACATTGGCGCTTCAAGACCCACCTGGCTATTAGCCATTTGGATGTTAATAAGATAAATAACATTGTTGCTGACATGAGAAAAGTCTTGGCCAAAAATCCTCAAGTTGAGCAGCAGAAGCTGCACAGGAGGGTGTTTCTGGATATTATAGATCCTGAAAATCAGGCTCTTTTGATATTGGTGTCTTGTTTTGTCAAAACCTCACACCACGAGGAATTTTTGTGCGTGAAGGAAGCTCTACTACTGGCTCTTCTTAGGGTCATTGGCCATCACCGAGCCCGACTTGCAACACCAGTTCGTACACTGCAGAAAATTTACAGCGATGCTGACTTGGAAAATATACCATATATGGATTCTATATTTAGTGGTACTGCAAGTGTTTCTAACAGTCCAATAGTAATAGAAACACCATACAAGATCAAAGCAGATGATACAACAAAAAGTCAATCAACCCGCCCATCCAACGAGGGAGATGATAAAAAGACAGCCGCACAAACCAAGGTCAGAGAAACTCATTCTGACTCCAAGGCAGATGTTGAAGCTGTGATATCTAATTCTGATGCAGATGGAAACTTGAAGGTAGCCGTTACATCTGAACATGAGCCAATGAAAATGGAGGCAAATAGTACGTTAAAGGAAAACCTGGAGGCTCCTCATACGTCTGCTTCTAACTCCACAGTTAGTGTATTTACTGCAAATAACTTGACTGAGAAGAATTCTGATGTTAAACAATCTAATAAGAATGCTGCCAAAGGAGGTGGACGTCCTAAGAATATGCCAACAAAACAGAAAGATGAAAGTAAACCAGCAGAGACTCAAATGTCAAGGCCTGTCCTTGAAGAGAATATTGTACTTGGTGTGGCATTGGAAGGATCAAAAAGAACTCTTCCTATTGAGGAGGAGATGGATTCATCTACTGCTCGAGAGGCAAAAGAAATGGCTGCCCAAAGTGGGAAGAGATCTCTAACCGCTGAGAATGGGGAAGATAAGTAA 1989 0.4173 MALPGSLQLSYDSGHCRNLGCYNQHMVLKRDCWRTKLFCNINRPIHTLFCKSHSFLGSGPSSELPISKVAATALARSYNLLQCSPVTVKLIPAIGLIILAVRGVGPLIYHTRKLLLQRSDNSWKKSSTHYVVTSYIQPLLLWTGALLICRAFDPLNLPSEAAQAVKERLLSFVRSLSTVLAFAYCISRVIQQAQKFFTESAANSCETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLFTLAGREIFMNFLSSVIIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGENREALYIPNHKFTMSVVRNLSQKTHWRFKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLDIIDPENQALLILVSCFVKTSHHEEFLCVKEALLLALLRVIGHHRARLATPVRTLQKIYSDADLENIPYMDSIFSGTASVSNSPIVIETPYKIKADDTTKSQSTRPSNEGDDKKTAAQTKVRETHSDSKADVEAVISNSDADGNLKVAVTSEHEPMKMEANSTLKENLEAPHTSASNSTVSVFTANNLTEKNSDVKQSNKNAAKGGGRPKNMPTKQKDESKPAETQMSRPVLEENIVLGVALEGSKRTLPIEEEMDSSTAREAKEMAAQSGKRSLTAENGEDK 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0582 662 SUPERFAMILY Sm-like ribonucleoproteins 260 330 IPR010920 -
Acco12g0582 662 Pfam Mechanosensitive ion channel 217 420 IPR006685 GO:0016020|GO:0055085
Acco12g0582 662 MobiDBLite consensus disorder prediction 485 509 - -
Acco12g0582 662 MobiDBLite consensus disorder prediction 626 640 - -
Acco12g0582 662 Gene3D - 276 331 IPR023408 -
Acco12g0582 662 MobiDBLite consensus disorder prediction 474 516 - -
Acco12g0582 662 Gene3D - 170 274 - -
Acco12g0582 662 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 10 649 IPR045042 -
Acco12g0582 662 MobiDBLite consensus disorder prediction 567 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0582 Acco-ChrAcco12 5225671 5230790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0582 41 662 Mechanosensitive Ion Channel Family AT5G10490 56.646 0.0 681