Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0574 ATGCGAATAATAAGACAGAGTGCGTTACATTTTTCCTTTTACTCTTTTTATTTTGACGGAAAGAAAGAAAGAAGGAAGAGAATGGTTTCTCAGACGATTGATCTGTTAAAGGAGGAACTCCCAGTGGATCAACAACCTCTTATTTTATCTGGGGATGTCAAAACTGGTCTCATCCTCGTCGACGTTGTCAATGGCTTCTGCACCGTTGGAGCTGGGAATCTGGCGCCAAGGCAACCAAACGAACAAATTTCTAGGATGGTAGATGAATCAGTGAGGCTCTCAAGAGTATTCACTGAAAAGAAGTGGCCAATTTTTGCCTTCCTTGATTCCCATCACCCAGATATTCCTGAACCCCCTTATCCTCCTCACTGTATTGTCGGAACAGAGGAAGCAAAATTGGTTCATGAATTGCTGTGGTTGGAAAATGAACCGAATGCAACACTCAGGTGCAAAGATTGCATCGATGGATTCCTTGGTTCTATTGAGAAAGATGGCTCTAATGTTTTCGTTAACTGGGTGGAAAGTCATCAGATAAAACAAATTTTGGTTGTTGGGATATGTACGGATATATGTGTCCTGGATTTTGTCTGTTCTGCACTGGCTGCCAGGAATCGGCGTCTTCTTCCTCCTCTGGAGCATGTGATTGTCTATTCCCATGCTTGTGCCACATATGATATTCCAGTTCATATAGCCAGAGATAACAAGGATGTGATAGCTCATCCACAGGAGCTGATGCATCATATTGGCCTTTACATAGCAAGGGGAAGGGGAGCCAAGATAGTATCAGAGCTGTTGAGTGCAATTATAGTCAGAAAGCAACTTTTCAATCTAGTTTTGAGGACTTCGGTTTGTAGCTTAACTGTCCTAGATGCTTTCTTTCAGAAGCCATATTTTGTCATCCATGAGAGTCGCATGTTGGCTGGTGGTCACCAACAATTATGCGTGGTGAAAATCGTGAAGCTCTTTACATATCCTGAAAAGCAGGCTCTCTTGATATTGGTGTCTTGTTTTGTCAAAACCTCGCACCACGAGGAATTTTTGTGCGTTAAGGAAGCTTTACTATTGGATCTTCTTAGGGTCATTGGCCATCACCGAGCCCGACTTTCAACACCAGTTCGTACACTGCAGAAAATTTACAGTGGCGCTGACTTGGATAATATACCATATATGGATTGTTCACTTCGAATTTGTGATTGCCATGGAGTTCCTCTGGGCCAGCTTCTTCGCCTTTATCAGGTTTCTAATTTGGAAGATTCCAGCTATCGGCATTATCATTTTGACCGTATGGGGTGTTGGCCCATTAATGCCCCAAGGCAACCAAACGAACAAATTTCTAGGATGGTAGATGAATCAGTGAGGCTCTCAAGAGTATTCACTGAAAAGAAGTGGCCAATTTTTGCCTTTCTTGATTCCCATCATCCAGATATTCCTGAGCCCCCTTATCCTCCTCACTGTATCCTCGGAACAGAGGAAGCAAAATTGGTTCCTGAATTGCTGTGGTTGGAAAATGAACCTAATGCAACACTGAGGTGCAAAGATTGCACCGATGGATTCCTTGGTTCTATTGAGAAAGATGGCTCTAATGTTTTCGTTAACTGGGTGGAAAGTCATCAGATAAAACAAATTTTGGTTGTTGGGATATGTACGGATATATGTGTCCTGGATTTTGTCTGTTCTTCACTGGCTGTCAGAAATCGGCGTCTTCTTCCTCTGGAGCATGTGATTGTATATTCCCATGCTTGTGCTACATATGATATTCCAGTTCATATAGCCAGAGATAACAAGGATGTGATAGCTCATCCACAGGTAGGACTTAGTGACTTCCATGTTGCATAG 1836 0.4265 MRIIRQSALHFSFYSFYFDGKKERRKRMVSQTIDLLKEELPVDQQPLILSGDVKTGLILVDVVNGFCTVGAGNLAPRQPNEQISRMVDESVRLSRVFTEKKWPIFAFLDSHHPDIPEPPYPPHCIVGTEEAKLVHELLWLENEPNATLRCKDCIDGFLGSIEKDGSNVFVNWVESHQIKQILVVGICTDICVLDFVCSALAARNRRLLPPLEHVIVYSHACATYDIPVHIARDNKDVIAHPQELMHHIGLYIARGRGAKIVSELLSAIIVRKQLFNLVLRTSVCSLTVLDAFFQKPYFVIHESRMLAGGHQQLCVVKIVKLFTYPEKQALLILVSCFVKTSHHEEFLCVKEALLLDLLRVIGHHRARLSTPVRTLQKIYSGADLDNIPYMDCSLRICDCHGVPLGQLLRLYQVSNLEDSSYRHYHFDRMGCWPINAPRQPNEQISRMVDESVRLSRVFTEKKWPIFAFLDSHHPDIPEPPYPPHCILGTEEAKLVPELLWLENEPNATLRCKDCTDGFLGSIEKDGSNVFVNWVESHQIKQILVVGICTDICVLDFVCSSLAVRNRRLLPLEHVIVYSHACATYDIPVHIARDNKDVIAHPQVGLSDFHVA 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0574 611 Gene3D - 53 240 IPR036380 -
Acco12g0574 611 Gene3D - 432 597 IPR036380 -
Acco12g0574 611 SUPERFAMILY Isochorismatase-like hydrolases 54 262 IPR036380 -
Acco12g0574 611 PANTHER - 28 264 IPR044717 GO:0008936|GO:0019365
Acco12g0574 611 CDD cysteine_hydrolases 57 229 - -
Acco12g0574 611 SUPERFAMILY Isochorismatase-like hydrolases 441 589 IPR036380 -
Acco12g0574 611 Pfam Isochorismatase family 55 225 IPR000868 -
Acco12g0574 611 Pfam Isochorismatase family 437 585 IPR000868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0574 Acco-ChrAcco12 5181949 5190335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0574 325 392 Mechanosensitive Ion Channel Family AT5G10490 67.647 3.41e-24 105