Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0569 ATGGAGTCAAGAACGAGAGGAGAGGTCATATGCGAGGAGGAGCCATCTCCGAGAGGCGTGCTGGAGATGACGGCGGCGGAGTCATCAGATCAGGGGAGCAGCGGTAGCGGATACAGCACGTGCTCCTCCTCCTCGGGGGAGAGGCTGCCGGCGGCGGCGATGGGGACCACGGAGAGACCGCCGGTGGGGAGGGAGGGGCAGAAGGCGCAGTTGAAGGGAGTAATGGAGGCGTTCAGGATAAACTCAGTGAGGAGGCTGTCGGCGATACCGTTGTTACAGTCGACGGTCACCATGTCCAAGAGCCTCAAGAAATTGGTTCGCATTAGAAGCGCTGAAGAAGCCATAGATCTTTCTTCTTTGACCAAATGGAAATCCTACCATTACTCCGACCTCGCCGCCGCCACCGACAACTTCAATCCTGAGAACTTGATCGGGAAAGGAGGGCATGCTGAAGTGTACAAAGGACGTTTGCCAGACGGCCAAATAGTAGCCGTAAAGAAGCTAGTGAATGAGGAAAAGAACGACGCAGATAACACCAGTAATTTCTTGACGGAGCTCGGAATCATAGCCCACATCGACCATCCCAATACTTGCCAATTTCTTGGCTTCGGAATCGACAAGGGCCTCTTCTTCGTCCTTCACTATGCCGCTCATGGCAGCCTCTCCTCCTTTCTCTTCGGTTCGGAAAAGCTGGAGTGGAGTGTGAGGTACAAGGTGGCCGTCGGAGTTGCAGAGGGACTGCAATATCTGCATCATGAATGCCCAAGACGAATCATTCACAGAGATATCAAGGCTTCCAACATTTTGCTCGATGACAATTATGAACCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAGATAAGTGGGACCACCATGTCGTGTTCCCTATAGAAGGGACATTTGGGTATCTAGCTCCAGAGTATTTCATGCATGGACTTGTGGATGAGAAGACCGATGTATTCGCTTATGGGGTTTTATTACTTGAGATCATCACAGGCCGTATGGCTGTTGATTCTGATAGTAGGCAGAGTCTTGTGATTTGGGCAAAGGCTCTACCGGACCCAAAAAACATGAAGGAATTAGCAGACCCTAGATTAGAGGATGATTATAATCCTATAGAAATGGAGCGTGCCATGGTTACTGCTTCCATGTGTGTACACCACTCAGCTTCCAAGCGTCCCTACATGAATCGGGTAGTGCAGATGCTGAAGGGGGAAGAAGGACCTATTGAAGTAAAGCCACAACAATCCATGGCCCCAAGATCTCTCATGTTGGATGCCTGTGATCTTGAAGATTATACTTGCTCCAATTACTTGAATGATATCAATCGTCACAGGCAACTAATCATGGAGTGA 1362 0.4985 MESRTRGEVICEEEPSPRGVLEMTAAESSDQGSSGSGYSTCSSSSGERLPAAAMGTTERPPVGREGQKAQLKGVMEAFRINSVRRLSAIPLLQSTVTMSKSLKKLVRIRSAEEAIDLSSLTKWKSYHYSDLAAATDNFNPENLIGKGGHAEVYKGRLPDGQIVAVKKLVNEEKNDADNTSNFLTELGIIAHIDHPNTCQFLGFGIDKGLFFVLHYAAHGSLSSFLFGSEKLEWSVRYKVAVGVAEGLQYLHHECPRRIIHRDIKASNILLDDNYEPEISDFGLAKWLPDKWDHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAYGVLLLEIITGRMAVDSDSRQSLVIWAKALPDPKNMKELADPRLEDDYNPIEMERAMVTASMCVHHSASKRPYMNRVVQMLKGEEGPIEVKPQQSMAPRSLMLDACDLEDYTCSNYLNDINRHRQLIME 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0569 453 MobiDBLite consensus disorder prediction 1 15 - -
Acco12g0569 453 PANTHER OS08G0249100 PROTEIN 10 425 IPR046958 -
Acco12g0569 453 SUPERFAMILY Protein kinase-like (PK-like) 124 427 IPR011009 -
Acco12g0569 453 Gene3D Phosphorylase Kinase; domain 1 107 215 - -
Acco12g0569 453 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0569 453 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Acco12g0569 453 Gene3D Transferase(Phosphotransferase) domain 1 217 420 - -
Acco12g0569 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Acco12g0569 453 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 217 419 - -
Acco12g0569 453 SMART serkin_6 138 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0569 453 MobiDBLite consensus disorder prediction 26 50 - -
Acco12g0569 453 ProSiteProfiles Protein kinase domain profile. 138 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0569 453 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0569 Acco-ChrAcco12 5135536 5137661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0569 119 408 Receptor kinase-like Gene Family AT1G60800 41.806 6.38e-69 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco12g0569 Pkinase 1.3e-40 CL0016