Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0556 ATGGACTACGTTACTCTCGTGCACTGCACTGAGTCCTTCTGCCTCTTACGCTATAAATACATGTTCCCAGCTTGTGAGTCTCTATCTATAGAGGTCACAAGCTATCTACATACCCATTATTCAAGCAACAACATGATGGCAAACACTACTATCTCATCGTCAACCCAAAACGAAAATGAGAGAATGCCTGCCTTTGGATTAGCCGCTAGAGACTCTTCAGGAATTGTCTCCCCTTTTCACTTCTCCAGAAGGGCCAACGGTGATCATGATATCACCATCAACATTCTGTACTGTGGGATCTGCCACGGGGATGTTCATTTTCTCCGGAATGAAGTGCAAGGCCATCATGCCTTCTATCCTATGGTTGCCGGGCACGAGATTGTGGGGAAAGTGATCAAGGTGGGTCGCAATGTAGAGAAATTCAAACTTGGCGATATAGCAGGTGTAGGTCCAATTTGTGGTTCATGTCAATCCTGTTCTAGCTGCAACCAAGGTTGGGAAGTATATTGTCCCAAAAGAATTGCAACTTATGGCTCAATTGATCGAGATGGATCTGTGACCTACGGTGGCTATTCTGATAAAACTGTGGTTGATGAACATTTTGCTGTCAAAATGCCCAATGGCTTGCCCCTTGATGGAGCAGCGCCACTATTATGTGCTGGACTCACAGTGTACAGTCCCATGAAGTACTATGGATTGTGCGAGGCTGGCCAGCATCTGGGTGTGGTAGGGTTAGGTGGACTAGGCCACGTGGCAGTCAAGTTTGCTAAGGCAATGGACATGAAGGTGACTGTGATAAGTACTTCTCCTGGCAAGAAGAAGGAAGCCTTGGAAAGCCATGGCGCTGATGCTTTCATACTTAGTACCGACCAACAACAATTGCAGGTTGCGTACGACAGTATGGACGGAATTATAGACACAGTTGCTGGACCTCACTCTCTCGATCCATTGGTTGATTTGTTGAAAACGGGAGGAAAATTGGTTTTGGTAGGGGCATCAGTGAAAAATCCTGAGTTACCAACTATGCCTTTAATGATGGGGAGGAAGATGATCGCAGGTAGTTTGGCAGGAGGAATGAAAGAGAGCCAAGAGATGATTGATTTTGCAGCGAAGCATAACATCACAGCAGATATTGAGGTTGTTTCAATGGATGACGTGAACACTGCTTTAGAACGAGTTGCCAAAAATGATGTCAAATATCGTTTTGTGATAGATGTCGCCAACACCCTCCATAAGGTCTCTCTTGTTGCCTAG 1254 0.4561 MDYVTLVHCTESFCLLRYKYMFPACESLSIEVTSYLHTHYSSNNMMANTTISSSTQNENERMPAFGLAARDSSGIVSPFHFSRRANGDHDITINILYCGICHGDVHFLRNEVQGHHAFYPMVAGHEIVGKVIKVGRNVEKFKLGDIAGVGPICGSCQSCSSCNQGWEVYCPKRIATYGSIDRDGSVTYGGYSDKTVVDEHFAVKMPNGLPLDGAAPLLCAGLTVYSPMKYYGLCEAGQHLGVVGLGGLGHVAVKFAKAMDMKVTVISTSPGKKKEALESHGADAFILSTDQQQLQVAYDSMDGIIDTVAGPHSLDPLVDLLKTGGKLVLVGASVKNPELPTMPLMMGRKMIAGSLAGGMKESQEMIDFAAKHNITADIEVVSMDDVNTALERVAKNDVKYRFVIDVANTLHKVSLVA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0556 417 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 124 138 IPR002328 GO:0008270|GO:0016491
Acco12g0556 417 CDD CAD1 65 405 IPR047109 GO:0016616
Acco12g0556 417 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 209 374 IPR036291 -
Acco12g0556 417 Pfam Zinc-binding dehydrogenase 247 370 IPR013149 -
Acco12g0556 417 SMART PKS_ER_names_mod 74 404 IPR020843 GO:0016491
Acco12g0556 417 SUPERFAMILY GroES-like 73 238 IPR011032 -
Acco12g0556 417 Gene3D - 220 376 - -
Acco12g0556 417 FunFam Cinnamyl alcohol dehydrogenase 220 376 - -
Acco12g0556 417 Pfam Alcohol dehydrogenase GroES-like domain 89 205 IPR013154 -
Acco12g0556 417 Gene3D - 68 406 - -
Acco12g0556 417 PANTHER ALDEHYDE REDUCTASE 59 409 IPR047109 GO:0016616
Acco12g0556 417 FunFam Putative cinnamyl alcohol dehydrogenase 6 377 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0556 Acco-ChrAcco12 5020671 5022599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0556 64 410 Monolignol Biosynthesis Gene Families AT2G21890 57.714 5.63e-140 403