Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0555 ATGGCAAGCCCTTCTGTCTCAGCTCCAGAAAACGAGAGAACACAAGTTTATGGATATGCCGCCAGAGATTCCTCAGGAATTGTCTCCCCTTTTCAATTCACCAGAAGGGCCATCGGAGATGATGATATCACCATTAGGATACTATACTGTGGGATTTGCCACGGCGATGTTCATTATCTTAGAAATGAAATGAATTTGCCAGAAGGCTATATCTTCTATCCTATGGTTCCCGGGCACGAGATTGTGGGGGAAGTGATAAAGGTGGGTCGTAATGTGCAGAAATTCAAAGTTGGTGATATAGCAGGCGTAGGTCCGACTTTTGATTCGTGTCGTTCCTGTTCTCACTGCAACGAAGGTTTGGAAGTATACTGCTCCAAAACAATTATGACTTATAATGCCATTGATAAGGACGGATCTGTGACCTATGGTGGCTATTCTGATAAGACTGTGGTTGATGAACATTTTGCTGTGAAAATACCCAATGGCATGACACTTGATAAAGCAGCACCATTGTTGTGTGCTGGCCTCACAGTTTATAGTCCCATGAAGTACTTTGGCTTGTGTGAGGCTGGTATGCATTTGGGTGTGGTGGGCTTAGGTGGACTAGGCCACGTGGCAGTTAAGTTTGCTAAGGCCATGAACATTAAGGTGACTGTGATAAGTACTTCTCCTGGGAAGAAGAAGGAAGCATTGGAAAGTCATGGTGCTGATGCTTTCATCGTTAGTACCGACCAACAACAAATGCAGGAAGCAAGGGGGACCATGGATGGAATCCTAGACACAGTTGCAGGGAATCACTCTGTTCATCCATTGGTTGATTTGTTGAAGACAGGAGGGAAACTGGTTGTGGTGGGAGCACCAATGCAAGAACCTCAGTTACCAGTTATTCCTTTAATCATGGGGAGAAAGACGATCGCTGGAAGTGCAGGAGGAGGAACGAAGGAGAGCCAGGAGATGATTGATTTTGCAGCGAAGCACAATATAACAGCAGATATAGAACTGATTCCCATGGATTATGTGAACACTGGCTTAGAGAGAGTTTCGAAGAATGATGTTAAGTATCGTTTTGTGATTGATGTGGCCAACACTCTCCATAAGAATGCCTCTGCTGGTACTAGTTAA 1122 0.4465 MASPSVSAPENERTQVYGYAARDSSGIVSPFQFTRRAIGDDDITIRILYCGICHGDVHYLRNEMNLPEGYIFYPMVPGHEIVGEVIKVGRNVQKFKVGDIAGVGPTFDSCRSCSHCNEGLEVYCSKTIMTYNAIDKDGSVTYGGYSDKTVVDEHFAVKIPNGMTLDKAAPLLCAGLTVYSPMKYFGLCEAGMHLGVVGLGGLGHVAVKFAKAMNIKVTVISTSPGKKKEALESHGADAFIVSTDQQQMQEARGTMDGILDTVAGNHSVHPLVDLLKTGGKLVVVGAPMQEPQLPVIPLIMGRKTIAGSAGGGTKESQEMIDFAAKHNITADIELIPMDYVNTGLERVSKNDVKYRFVIDVANTLHKNASAGTS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0555 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 328 IPR036291 -
Acco12g0555 373 CDD CAD1 18 359 IPR047109 GO:0016616
Acco12g0555 373 Pfam Alcohol dehydrogenase GroES-like domain 41 159 IPR013154 -
Acco12g0555 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Acco12g0555 373 Gene3D - 19 360 - -
Acco12g0555 373 FunFam Putative cinnamyl alcohol dehydrogenase 6 331 360 - -
Acco12g0555 373 SUPERFAMILY GroES-like 24 191 IPR011032 -
Acco12g0555 373 SMART PKS_ER_names_mod 26 358 IPR020843 GO:0016491
Acco12g0555 373 Pfam Zinc-binding dehydrogenase 201 324 IPR013149 -
Acco12g0555 373 FunFam Cinnamyl alcohol dehydrogenase 174 330 - -
Acco12g0555 373 Gene3D - 174 330 - -
Acco12g0555 373 PANTHER ALDEHYDE REDUCTASE 12 363 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0555 Acco-ChrAcco12 5011127 5012650 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0555 13 367 Monolignol Biosynthesis Gene Families AT4G37990 60.000 1.89e-138 397