Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0552 ATGGCTTCACAACCAGAGATGGAGCATCCCAAGAAAGCGTTTGGATGGGCTGCTAGGGATACGTCTGGCCTTCTCCCTCCCTTCCAGTTCTCCAGAAGGCTAACTGGAGAGAAAGATGTGACGTTTAAAGTTTTGTATTGCGGGATTTGCCACTCGGACCTCCACCTGATTAGGAATGAGTGGGACAATTCCATCTATCCACTTGTACCCGGGGAATCTGGACGCCTCTGTTTTGCAATTGTCCTTCATGTGTCGTATGTGGATGGGACCATCACATGTGGAGGTTACTCTGACTTAATGGTTGCAGATGAACACTTTGTGATCCGCATTCCAGACAACCTTCCTCTTGATGCTGCTGGTCCTCTCCTTTGTGCTGGGATCACTGTATATAGCCCTTTGAGGCATTTCGGGCTAGACAAGCCTGGTCTGCATGTTGGTGTGGTTGGCCTTGGTGGTTTAGGCCATATGGCTGTGAAGTTCGCCAAGGCCTTCGGTGCTCATGTGACAGTAATAAGTACATCAACTGGTAAGAAGGGGGAAGCAATAAAGAATTTAGGAGCTGACTCCTTTGTGGTCAGCCGAGAGACAGATCAGATGCAGGCTGTAATGGGTACCCTTGATGGTATCATTGACACTGTTTCTGCTGTCCATCCTCTGTTGCCTTTGATTGCTTTGTTGAAATCTCATGGAAAACTCGTTATGGTCGGTGCCCCAGAGAAGCCTCTAGAACTCCCAGTCTTTCCTTTACTTACGGGGAGAAAGTTGGTTGCTGGGAGTCTCATTGGAGGGATGAAGGAGACTCAAGAAATGATTGATTTTGCTGCTGAGCACAGTGTTAAACCGGACATTGAGGTGGTTCCAATGGACTATGTGAACAAGGCAATGGAGCGTCTTGCCAAAGCAGATGTGAAGTATCGATTTGTCATCGACATAGGAAACACACTGAAGCCAGATCCTTCTCGCGATTGA 969 0.4799 MASQPEMEHPKKAFGWAARDTSGLLPPFQFSRRLTGEKDVTFKVLYCGICHSDLHLIRNEWDNSIYPLVPGESGRLCFAIVLHVSYVDGTITCGGYSDLMVADEHFVIRIPDNLPLDAAGPLLCAGITVYSPLRHFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAHVTVISTSTGKKGEAIKNLGADSFVVSRETDQMQAVMGTLDGIIDTVSAVHPLLPLIALLKSHGKLVMVGAPEKPLELPVFPLLTGRKLVAGSLIGGMKETQEMIDFAAEHSVKPDIEVVPMDYVNKAMERLAKADVKYRFVIDIGNTLKPDPSRD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0552 322 Gene3D - 124 260 - -
Acco12g0552 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 280 IPR036291 -
Acco12g0552 322 PANTHER ALDEHYDE REDUCTASE 5 72 IPR047109 GO:0016616
Acco12g0552 322 Pfam Zinc-binding dehydrogenase 152 275 IPR013149 -
Acco12g0552 322 Pfam Alcohol dehydrogenase GroES-like domain 38 71 IPR013154 -
Acco12g0552 322 Gene3D - 2 74 - -
Acco12g0552 322 Gene3D - 88 306 - -
Acco12g0552 322 SMART PKS_ER_names_mod 23 309 IPR020843 GO:0016491
Acco12g0552 322 SUPERFAMILY GroES-like 24 142 IPR011032 -
Acco12g0552 322 CDD CAD1 14 310 IPR047109 GO:0016616
Acco12g0552 322 FunFam Putative cinnamyl alcohol dehydrogenase 6 282 311 - -
Acco12g0552 322 FunFam Cinnamyl alcohol dehydrogenase 125 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0552 Acco-ChrAcco12 4994974 4997455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0552 11 320 Monolignol Biosynthesis Gene Families AT4G37990 60.795 1.49e-133 382