Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0535 ATGATGGAGGAGAAATTTGATATTTGGATATTCAGATTTGTTCTGGTATATGCCCTTTGCATTTTTGTGTTCACCAGACCATCTTCTACAAGTGAAGGATTTGTAAGCATAGCTTGTTGTGCTGATTCAACATATACAGATCCAGAGACCAACTTGAGTTACAAATCAGATTACACATGGTTTCCAGATAGAACAAGCTGCATAAGCTTGACCAATCATAATGCAAACCAAAGAGCAAGAGTGTTTGATATTACAGATAAGAAAAAGAGATGTTACAGCTTGCCAACAATTCAGGACAGAGTGTATATGTTAAGGGGCTCATTTCCACCTGACAATTCACTTGGGGATTTTTCTTTTGATGTGTCAATTGCAGTAACATCATTAGGTTCAGTAAGACCATCCCAGGACTTGGAAATAGTTGAGGGAATTTTCAGAGCTTCTAAGAACTCCATAGACTTTTGCTTAGTGAAGGAGGAGCAGGAAGATGGGAATCCTTATATTTCGCAGATCGATTTAAGGCCTTCGCATGAAGAGTATCTGCGGGATTTACCTTCTAGTGTTCTAAAATTGATCAGTAGAAATAATCCAGGGGGCACAGTAAGTGACATCAGGTACCCAATAGACTCAAATGACCGAATCTGGAAAGAAACTTCAATCTCATCAGCATATCCCATATCATTACTCAATGTCAGCATTTCTGGCCAAATATCTAAAGTGACCCCTCCTCTTCAAGTTTTACAAACTGCTCTTACACATTCTGAGAGAGTAGAGTTCATTCACAACATCTCAGAAACACGGAACCATGACTACCGCGTGTTCCTCTACTTCCTTGAATTAAGCAACACTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTTAATGGTGACCTTAAAGAGAAGAGTTTTGATATTATGGCTGGAGGCTCCAACTATAGACACATAGTGCTGAACGTTTCATCAAATGGTGCAATCAATTTAACCTTGGCCAAAGAATCTAGTTCTGAGTATGGACCACTTTGTAATGCATATGAAATCCTGGAGGTATTTCCAGGGAATAAAGAGACCAATCAAACCGACTTGCAAGAAATGCAGAAGGTGGCAGAAGAGTTGAAGATGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGATCCATGCATGCCTTTTCCTTGGAATGGAGTAGAATGTGATCTTTTGAATGATTCAACTTGTATCAATAAGCTAGATCTTTCTTCAAGTAATCTCAGAGGACCAATTCCTACAGGGGTCACTGCGTTAACCAACTTAGAAAGATTGAACCTGAGTCACAATAACTTCAAAGGAAGTGTCCCTCAATTTCCACCTTCCTCTTCGCTGATATCACTAGATCTGAGCTACAATGATCTCACGGGATCGATTCAGGGATCAATTGCCTCACTGTCACATCTAAAATCCTTATATTTCGGCTGCAATCCTGACATGAGTAAGGAGGTCCCATCAAACTTCAACAGTTCCCTCAATACAGATTATGGAAGATGCAACTATAAAAGATCAAGAATTTCAGCACCACTCATCATTGGAACCGTTACATGTGGGTCGATCTTGCTTACATTGGCTCTTGGATTTCTTTTTGCTTGCCATTATAAGAAACTATCAATTCCCTGGGGAAGATTTGTTGATCAGAAACACCCTAACCCAATGGCAGCAAATATCATCTTCTCTTTGCCCAGTAAAGACGATTTCTCCATGAAGTCAGTATATATTCAAAAGTTTACCCTGGATTATATAGAGACAGCCACCGAGAAGTACAAAACATTAATAGGTGAAGGAGGGTTTGGCTGTGTTTACAGGGGAATTCTAGATGAGGGTCAAGAAGTGGCCATGAAAGTCCGTTCAGACACATCAACTCAGGGAACTAAGGAATTTGACAATGAGCTAAATCTGCTTTCTGAGATACAGCATGAAAACTTGGTGCCTCTTCTTGGTTACTGTAGTGAAAATGATCAACAAATTCTGGTGTACCCCTTTATGTCCAACGGCTCTTTACAGGATAGACTTTATGGAGAACCATCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCAATTGCTCTGGGTGCAGCTAGAGGTTTGGCATATCTTCATACATTTCCGGGGCGTTCTATTATACATAGGGATGTAAAATCCAGCAATATACTTCTGGATCATAGCATGACAGCTAAAGTAGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACATCGGTGCTTCTCTTGAACTAAGAGGAACAGCAGGATATCTGGATCCCGAGTACTATACTACCCAGCAGTTATCTGCAAAAAGTGATGTCTTCAGCTTCGGGGTGGTTCTACTTGAAATCATAACTGGTCGAGAACCTCTCAACATCCAAAGGCCACGCAACGAGTGGAGCCTAGTCGAATGGGCTAAAGCATATATAAGGGCAGCAAAAATTGATGAAATAGTGGATCCAGGCATAAAAGCAGGGTATCAGGCAGAGGCAATGTGGAGAGTGGTGGAAGTAACACATTCATGTGTTGAAACCTGCTCAAGATTCAGACCTGAGATGGAGGATGTTGTGAGAGAGTTGGAGGATGCTCTAATTATAGAGAACAATGCATCAGAATATATGAAGTCCATAGAGAGCCTTGGTGGCTCTAATCGCTATTCCATTGTAATAGACAAAAGGGTGCTACCACCATCTTCTTCGTCTACAACGGAATCAACCATCATCATAAACCAAACCACGTCCTTCCCACAGCCCAGATAG 2787 0.4098 MMEEKFDIWIFRFVLVYALCIFVFTRPSSTSEGFVSIACCADSTYTDPETNLSYKSDYTWFPDRTSCISLTNHNANQRARVFDITDKKKRCYSLPTIQDRVYMLRGSFPPDNSLGDFSFDVSIAVTSLGSVRPSQDLEIVEGIFRASKNSIDFCLVKEEQEDGNPYISQIDLRPSHEEYLRDLPSSVLKLISRNNPGGTVSDIRYPIDSNDRIWKETSISSAYPISLLNVSISGQISKVTPPLQVLQTALTHSERVEFIHNISETRNHDYRVFLYFLELSNTVRSGQRVFDIYLNGDLKEKSFDIMAGGSNYRHIVLNVSSNGAINLTLAKESSSEYGPLCNAYEILEVFPGNKETNQTDLQEMQKVAEELKMQNQGNKVLESWSGDPCMPFPWNGVECDLLNDSTCINKLDLSSSNLRGPIPTGVTALTNLERLNLSHNNFKGSVPQFPPSSSLISLDLSYNDLTGSIQGSIASLSHLKSLYFGCNPDMSKEVPSNFNSSLNTDYGRCNYKRSRISAPLIIGTVTCGSILLTLALGFLFACHYKKLSIPWGRFVDQKHPNPMAANIIFSLPSKDDFSMKSVYIQKFTLDYIETATEKYKTLIGEGGFGCVYRGILDEGQEVAMKVRSDTSTQGTKEFDNELNLLSEIQHENLVPLLGYCSENDQQILVYPFMSNGSLQDRLYGEPSKRKVLDWPTRLSIALGAARGLAYLHTFPGRSIIHRDVKSSNILLDHSMTAKVADFGFSKYAPQEGDIGASLELRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIITGREPLNIQRPRNEWSLVEWAKAYIRAAKIDEIVDPGIKAGYQAEAMWRVVEVTHSCVETCSRFRPEMEDVVRELEDALIIENNASEYMKSIESLGGSNRYSIVIDKRVLPPSSSSTTESTIIINQTTSFPQPR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0535 928 SUPERFAMILY Protein kinase-like (PK-like) 577 869 IPR011009 -
Acco12g0535 928 SUPERFAMILY L domain-like 378 498 - -
Acco12g0535 928 SMART serkin_6 597 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0535 928 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
Acco12g0535 928 Gene3D Transferase(Phosphotransferase) domain 1 673 886 - -
Acco12g0535 928 FunFam receptor-like protein kinase FERONIA 570 672 - -
Acco12g0535 928 PANTHER OS07G0107800 PROTEIN-RELATED 35 873 - -
Acco12g0535 928 MobiDBLite consensus disorder prediction 906 928 - -
Acco12g0535 928 Pfam Protein tyrosine and serine/threonine kinase 600 869 IPR001245 GO:0004672|GO:0006468
Acco12g0535 928 Gene3D Ribonuclease Inhibitor 361 517 IPR032675 -
Acco12g0535 928 Gene3D - 189 349 - -
Acco12g0535 928 Coils Coil 354 374 - -
Acco12g0535 928 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 673 882 - -
Acco12g0535 928 ProSiteProfiles Protein kinase domain profile. 597 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0535 928 Pfam Malectin-like domain 41 348 IPR024788 -
Acco12g0535 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Acco12g0535 928 Gene3D Phosphorylase Kinase; domain 1 569 672 - -
Acco12g0535 928 CDD STKc_IRAK 603 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0535 Acco-ChrAcco12 4818142 4824593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0535 20 876 Receptor kinase-like Gene Family AT1G67720 33.296 7.38e-127 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco12g0535 Malectin_like 5.4e-47 CL0202