Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0511 ATGGCGTCCGAAAGCTCCACCGACAAGAACGTTATCTTCAGAAAACTGAAGGCGAAGTCCGAAAATAAGATGTGTTTCGATTGTAATGCTAAGAATTCAAATTGGGCGTCCGTCACTTATGGGATTTTTCTCTGCATCGATTGCTCGGCTGTTCATCGCAGTCTTGGGGTCCACATAAGTTTTGTGAGATCTACAAATTTGGATTCATGGACCCCTGAGCAACTAAAAATGATGAGTTTTGGAGGAAACAATCGCGCAAAGGTTTTCTTTAAGCAACATGGTTGGACAGACGATGGTAAAATAGAGGCCAAGTATACATCTAGAGCTGCAGAGTTGTATAGACAGATTCTTACAAAGGAAGTTGCTAAAAGTATGGCTGAGGAGGCTGATTTGCCAACATCACCTCTTGCTTCTCATTCTTCACAAATTTCTAATGGACCTCCTGAAGTTGAAACCAAGGAAGAACCAAAAGAGAACACTGGTGGGAAGCCGGAAATTCCTGAAAGCTCTGCGTCACCAAGAGCTTCTCATACTGTTTCTTCTGTTGTAAAGAAGCCTATTGGTACAAAAAAGCCTGGGAAGAGTGGGGGTCTTGGTGCCCGGAAGCTTACTAAAAAGCCGAGTGAGTCTCTCTATGAGCAGAAGCCGGAAGAACCACCTGCTCCTGTTTCTTCTTCAACAAATAGCAACTTGCTTTCTGGGCCAACCCCGGCATCTCGGTTTGAGTACGCTGATGATGTCCAGTCTTCTGAGTCAAACTCTGGAGGGTCACATCTAATTAGTCATGTGGCTCCGCCAAAGTCATCAAGCTTCTTTGCTGATTTTGGAATGGATAGTGGTTTTCCAAAGAAATATGGTTCAAATTCCTCAAAAGTGCAAGTTGAAGAATCTGATGAAGCGAGAAGGAAGTTCTCAAATGCTAAATCTATTTCTTCTTCCCAATTTTTTGGGGATCAGAACAGAGCAGCAGATGTGGATGCTCAAGTTACTTTGTCGAAGTTTTCCGGTTCATCTTCCATCTCCAGTGCCGATATTTTTGGCCATTCTGAATCTCCCATTGATGTCACTGCTAATGACATCATAAATCGACTGTCCTTCCAGGCTCAGCAGGATATATCCAACATTAAAAATATTGCTGGAGAGACTGGAAAGAAGCTCAGCTCACTGGCCTCCAATTTGTTAACGGACCTTCAAGACAGAATTCTTTAA 1209 0.4318 MASESSTDKNVIFRKLKAKSENKMCFDCNAKNSNWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNNRAKVFFKQHGWTDDGKIEAKYTSRAAELYRQILTKEVAKSMAEEADLPTSPLASHSSQISNGPPEVETKEEPKENTGGKPEIPESSASPRASHTVSSVVKKPIGTKKPGKSGGLGARKLTKKPSESLYEQKPEEPPAPVSSSTNSNLLSGPTPASRFEYADDVQSSESNSGGSHLISHVAPPKSSSFFADFGMDSGFPKKYGSNSSKVQVEESDEARRKFSNAKSISSSQFFGDQNRAADVDAQVTLSKFSGSSSISSADIFGHSESPIDVTANDIINRLSFQAQQDISNIKNIAGETGKKLSSLASNLLTDLQDRIL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0511 402 MobiDBLite consensus disorder prediction 134 148 - -
Acco12g0511 402 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 4 402 - -
Acco12g0511 402 MobiDBLite consensus disorder prediction 127 267 - -
Acco12g0511 402 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Acco12g0511 402 SUPERFAMILY ArfGap/RecO-like zinc finger 12 125 IPR037278 -
Acco12g0511 402 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 1 137 - -
Acco12g0511 402 Gene3D Arf GTPase activating protein 1 138 IPR038508 -
Acco12g0511 402 Pfam Putative GTPase activating protein for Arf 13 112 IPR001164 GO:0005096
Acco12g0511 402 MobiDBLite consensus disorder prediction 281 307 - -
Acco12g0511 402 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Acco12g0511 402 CDD ArfGap_ArfGap2_3_like 8 123 - -
Acco12g0511 402 MobiDBLite consensus disorder prediction 220 236 - -
Acco12g0511 402 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Acco12g0511 402 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Acco12g0511 402 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Acco12g0511 402 MobiDBLite consensus disorder prediction 243 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0511 Acco-ChrAcco12 4571211 4574514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0511 5 83 C2H2 Transcription Factor Family AT3G07940 48.750 4.89e-19 84.7