Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0496 ATGGGTATACCCAGAGTTTTCTATTCTTTGAAAAATTTTAAATTTTTGTCTGTTGGTAAATCAACTCTTGAAATGGACGGAGTTAATAACAGCGGCTCCGGCGGCGGCACGCAGACGCCGGCTCCGGCTCCCATTCCCAATACCAACGCGCCTCCTCCGTTTCTTAGTAAGACATATGACATGGTGGATGACCCGTCCAGTGATGCGATCGTTTCTTGGAGCTCAACCAACAATAGCTTTGTGGTTTGGAACCCTCCCGAGTTTGCCAGGGACCTCTTGCCCAAGTACTTTAAGCACAATAACTTCTCCAGCTTTGTTAGGCAGTTGAATACATATGGTTTCAGGAAGGTTGATCCAGATCGGTGGGAATTTGCTAATGAGGGCTTTTTGAGGGGTCAGAAGCACTTGCTTAAGAGTATAACCCGGCGAAAACCTGCCCATGGTCATAGTCATCAACAGGCGCAACAATCTCCTGGGCAGAGTTCATCTGTAGGGCCATGTGTAGAGGTTGGGAAGTTTGGTCTAGAGGAAGAGGTTGAAAGGCTCAAAAGAGATAAGAATGTGCTCATGCAGGAGCTTGTGAGGTTGAGACAGCAGCAACAGGCCACTGATAACCAGATGCAACAAATGGTTCAGCGCCTTCAGGGGATGGAACAACGTCAGCAGCAAATGATGTCATTCCTTGCAAAGGCTGTTCAGAGCCCTGGCTTCTTGACTCAGTTTGTACAACAGCAAAATGAGAGCAATAGGCGCATAACAGAAGCCAACAAGAAACGACGGCTTAAGCAGGATGGTATAGCTGAAACAGAGTGTGCTACTGCTTCTGATGGACAAATTGTTAAGTATCAACCATTGGTGAATGAAGCTGCTAAAGCAATGCTAAGGCAGATCATGAAATTGGATACCCCTTGGCTAGGATCTTTTGGTAATAACTCAGACAATTACTTGATTGGTGATAGTTCAACATCATCAGGGGCAATGGACAGTGGCAGCACTTCAAACCGGAGCCGTGGAGTAACACTTCAAGAGGTCCCCCCAACTTCAGTGAATGCTCCCTCAGCTGGCAAATCTGAAATACAATCTTCTCCACAGTCTGCAGCTTCTGAAAAAGTTACGGCTGCTCAATACCCTGATGTAAATGTGCTGGGTAGTGCTTCTGAGAAACCTACTGTCCCTGTTTCTGAGGTAGATGTCATGCCTGAGCTTTCTCAGATACCAGAGATGGCGACAGGAAGTATTCTTGATATTCCAGAAGAGAATTATATGGCACCTGAAACAGGAAATGATGGATTCATGGATCCTAACATATTTGGGGTAAACGAGTCGATGCCCATTGATTTTGGTAGTTTTTCACCTGATACAGACATTGACGACTTACTACGCAACTCTTCTTTTTGGGAAGACTTGGTGCAAAGTCCACTGCCGGAGGATATCGAGATTGATACTGCTGATGTGTCCGAGGGAAATGAGGTGCAGCCAGTGGAAAATGGATGGGGCAAAGCAGAACATATGGATCAACTTACAGAGCAGATGGGTCTCCTTTCATCTGATGCAAAAAGAGTTTGA 1566 0.4591 MGIPRVFYSLKNFKFLSVGKSTLEMDGVNNSGSGGGTQTPAPAPIPNTNAPPPFLSKTYDMVDDPSSDAIVSWSSTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHSHQQAQQSPGQSSSVGPCVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQMQQMVQRLQGMEQRQQQMMSFLAKAVQSPGFLTQFVQQQNESNRRITEANKKRRLKQDGIAETECATASDGQIVKYQPLVNEAAKAMLRQIMKLDTPWLGSFGNNSDNYLIGDSSTSSGAMDSGSTSNRSRGVTLQEVPPTSVNAPSAGKSEIQSSPQSAASEKVTAAQYPDVNVLGSASEKPTVPVSEVDVMPELSQIPEMATGSILDIPEENYMAPETGNDGFMDPNIFGVNESMPIDFGSFSPDTDIDDLLRNSSFWEDLVQSPLPEDIEIDTADVSEGNEVQPVENGWGKAEHMDQLTEQMGLLSSDAKRV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0496 521 MobiDBLite consensus disorder prediction 150 164 - -
Acco12g0496 521 MobiDBLite consensus disorder prediction 322 371 - -
Acco12g0496 521 FunFam Heat shock transcription factor 1 47 144 - -
Acco12g0496 521 SUPERFAMILY "Winged helix" DNA-binding domain 50 143 IPR036390 -
Acco12g0496 521 Coils Coil 172 220 - -
Acco12g0496 521 Pfam HSF-type DNA-binding 54 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco12g0496 521 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 48 346 IPR027725 -
Acco12g0496 521 PRINTS Heat shock factor (HSF) domain signature 105 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco12g0496 521 PRINTS Heat shock factor (HSF) domain signature 54 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco12g0496 521 PRINTS Heat shock factor (HSF) domain signature 92 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco12g0496 521 ProSitePatterns HSF-type DNA-binding domain signature. 93 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco12g0496 521 SMART hsfneu3 50 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco12g0496 521 MobiDBLite consensus disorder prediction 142 165 - -
Acco12g0496 521 Gene3D - 47 144 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0496 Acco-ChrAcco12 4392112 4398763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0496 26 515 HSF AT1G32330 54.016 4.16e-170 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Acco12g0496 HSF_DNA-bind 4.4e-33 CL0123