Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0495 ATGACGTTGGTAAGAGAAAGGAGGCAACAGGAAGCTTTAAGGCTTTCCTTACCATCACCTCCAATTCCAGGATCAGGTTTCTGCCATCAAACTCAAACCCCAACCTCCTGTAGCAACTCTCTGGCCACCAAGAACCTATTGAGTCTCGAGAAACTCACAGTTCTTGGCCATGGCAATGGTGGTACAGTGTATAAAGTTCATCACAAGAAGAACCAGACCTTGTATGCTTTGAAAGTCCTCAGGTTCAACCAGAATGCTCTTGATATCTCTCAGCAGGCTAAGTGTGAGGCGGAGATTCTCAGAAGAGTGGATTCACCATATATTGTGAAGTGCCATGAAGTTTTTGACAATAATTGCAGTGAATCTCAGGTAAATGAAGGTAGTGGTATTAGCTTTGTTATGGAATACATGGAAAGAGGCTCACTACATGATGTCCTGAGAGAACACAAGGCACTACCAGAGGAAGTGATATCTGTCTTGGCAAAGAGAGTTTTGGAAGGACTCAACTATTTGCATGGCATGGACATAGTGCACAGAGATATTAAACCTTCAAACTTGCTTGTGAATGACAAAGGGGAGGTAAAAATTGCAGATTTTGGAGTCAGCCATGTGGTAAAAGGAAGGTTTGAGGCATCAGATTGCAGTGCAGGAACTTGTGCTTATATGAGCCCAGAAAGGGTTGATCCTGAGAGATGGGGAGGTGAAAATGCAGATGAGTTTGCAGGGGATGTGTGGTCATTAGGGGTTTTGATGCTAGAATGTCTTCTGGGTCATTTTCCTTTTACTGATGCAGGCCAAACAACAGACTGGGTTACATTGATGTGTGTGATTAGTTCTGGTGAGAAGCTTGAAATGCCAGAGAAGGCATCACCTGAGTTCAAAAGCTTTGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGGGCAACAGTTGGTGAGCTTCTTGATCATCCTCTTGTGAATAGCAAGTCTTGTCCTTCTTCTAGCAAAGAATTGCTCAATTATCCTAAGCATTGTTGA 1020 0.4324 MTLVRERRQQEALRLSLPSPPIPGSGFCHQTQTPTSCSNSLATKNLLSLEKLTVLGHGNGGTVYKVHHKKNQTLYALKVLRFNQNALDISQQAKCEAEILRRVDSPYIVKCHEVFDNNCSESQVNEGSGISFVMEYMERGSLHDVLREHKALPEEVISVLAKRVLEGLNYLHGMDIVHRDIKPSNLLVNDKGEVKIADFGVSHVVKGRFEASDCSAGTCAYMSPERVDPERWGGENADEFAGDVWSLGVLMLECLLGHFPFTDAGQTTDWVTLMCVISSGEKLEMPEKASPEFKSFVQRCLEKDWRKRATVGELLDHPLVNSKSCPSSSKELLNYPKHC 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0495 339 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 35 323 - -
Acco12g0495 339 Gene3D Phosphorylase Kinase; domain 1 43 132 - -
Acco12g0495 339 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Acco12g0495 339 PRINTS Tyrosine kinase catalytic domain signature 242 264 IPR001245 GO:0004672|GO:0006468
Acco12g0495 339 PRINTS Tyrosine kinase catalytic domain signature 134 147 IPR001245 GO:0004672|GO:0006468
Acco12g0495 339 SUPERFAMILY Protein kinase-like (PK-like) 50 326 IPR011009 -
Acco12g0495 339 Gene3D Transferase(Phosphotransferase) domain 1 133 336 - -
Acco12g0495 339 ProSiteProfiles Protein kinase domain profile. 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0495 339 CDD PKc_MAPKK_plant_like 48 321 - -
Acco12g0495 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Acco12g0495 339 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Acco12g0495 339 SMART serkin_6 49 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0495 339 Pfam Protein kinase domain 50 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0495 Acco-ChrAcco12 4388812 4389831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0495 1 323 MAP Kinase Kinase Gene Family AT1G32320 52.012 2.46e-107 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Acco12g0495 Pkinase 6.7e-64 CL0016