Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0486 ATGAGACAGAACGAGGGTAAAGGGGTATTTTCGTTCATAAGCCTAACTAACTTGAAGGTAGGTGGGAGTTATCCTGTACAGATTGGTAGTTCAACCGAAAAAGTGGACACGCCACTGAGGATTCCAGATTCCAGAGCCTTCCAGAATGGACGTTTTGTCATTGTTTTTGTGATTTCGACCAAGTGGGCGAAGACTGAGGTCCACAGGGAGCTACCTCGGGATGAAATGGTGGAAGGAAGAGTTTGTTTGCCCAGGGAAGCTAGAAAAGTATTAGAATCTTTGAAGCGTAAAAGGCTTCATCGAGCAACATCTTCAACTGCCAACAAAACAAGTGTTGCTAATATGATGACACGAAGTGGAGGAGATGCTTTAAGGGCTTCTTCATCATGTGGTATGAGATTGCATGGTAATGCAGAAGCCTTTTCCAAGCGGAAGGTGGATAAGTTTGACATGAGTGATCTAGAATGGATTGAAAAAATTCCCGAGTGTCCTGTGTACTCCCCAACTAAGGAGGAATTTGAGGACCCTTTGGTGTATTTGCAAAAGATAATTCCTGTGGCTTCAAGATATGGTATATGCAAGATTATTTCTCCTTTGAGTGCTTCCGTTCCTGCTGGAGTTGTGTTAATGAAGGAGAAAGCAGGATTTAAGTTTGCGACTAGAGTACAGCCACTTCGCCTTGCTGAGTGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGAAATTATACATTTCGCGATTTTGAAAAAATGGCGAACAAGGTTTTTGCACGTAGATATTGCAGTGCTGGATGTCTTCCTGCCTCATTTTTGGAAAAAGAGTTTTGGCATGAAATTAGCTGTGGAAAGATGGAAACTGTAGAATATGGATGTGATGTAGATGGTAGTGCCTTTTCCTCTTCTCCCAATGATCAACTTGGGAGCAGCAAATGGAATTTGAAGAAGCTTTCTCGGCTTCCCAAATCCATTTTGCGGCTCTTGGAAACAGTAATTCCGGGAGTAACAGAACCCATGCTTTACATTGGAATGCTGTTTAGTATGTTTGCTTGGCATGTTGAGGATCACTATTTGTACAGTATTAATTATCATCATTGCGGGGCACCAAAAACTTGGTACGGAATTCCAGGTCATGCAGCTTTGGAATTTGAAAGGGTGGTAAGAGAACATGTGTATACTAATGATATTCTGTCAAGTGAAGGGGAAGATGGAGCCTTTGATGTTCTTCTGGGGAAAACAACTTTGTTTCCTCCAAATATTTTGTTGGAATATGAAGTGCCGGTCTACAAAGCTGTTCAAAAACCGGGAGAGTTTATTGTAACCTTTCCTAGAGCGTATCATGCTGGTTTTAGTCATGGTTTTAACTGTGGAGAAGCAGTGAATTTTGCCATTGGTGATTGGATTCCATTGGGGGCCATTGCCAGCAGGCGATATGCACATCTAAACAGGGTTCCGCTGCTACCTCTTGAAGAACTTTTATGCAAAGAAGCAATGCTCCTCTATACAAGTTTAGAACTTGAAGATTCAGATTTTCCTTCTGCAGACTCGATGTTTCATAGTAGCATCAAGATCTCTTTTACTAATTTGATGCGCTTCCAGCATTGTGCTCGCTGGTTATTAATTAAATCAGGGGCGTGCACAAATGTTTCTTTACACTCCCATGGCTCAATTCTCTGTAGTCTCTGCAAACGTGACTGCTATGTAGCATATGTTGACTGTGACTGTCACATGCATCCAGTGTGTCTTCGCCATGATATTGAATCTCTTGACTTCACCTGTGGGAGCAAACACTCTCTTTACTTGAGGGAGGATATTGAAGATATGGAAGCTGCGGCCAAGAAGTTTGAGCAGGAAGATGGTATATTGGATGAGATAATTAAGCAGATCAAGACTGACAATAACATGTATTCATATCCCTTGTCAAGTATGTTTCAGAGAGCTGAGGCCGATGGATATACCCCTTATGGCGAGATAAAATTCGTTCCTGCTGTTGAATCTTCTCAGTCAGGCTCAGATCTGTTAATGAATGTTCAAGAGTGTGCTATTCAAAGTCAATGGGCTTCGAGGCATTACTCAGGATCGGAATATCACAAATCCGAAGTGTCTGATGTTTCCATCTTTTCTGCTGCTTCTGCTCTTTGCTCTCTTTCAGAACCTCTTGAGTGTCATTCTTCAACTAGTAAAAACGATGAGGGGCGTGCAAACTCGGGCATTGTTAATTCTGAAGAGCTTCGTGAAGGAGTGTCCAACAGTGTATGTGAATCTTTAGCATCCCCTACTCGGGATCACGACAGCTCGATTAAGCCTCAGGGTGGTGATCTTTATGGATTAGAGATGAAATCGATGGCGCATGTTGACAGTGATGATTCTGATTCAGAGATATTTTGGGTAAAGCGGCCTTCTTCTTTGAAGGCAGAGAGGAGAAATGGGGACGATGGGATGGGTCCCAAACATTCTGACCACCAGGGGCTAAAACGATTGAAGAAAAACTGTGATGAGGGAAGAAGTGGACAACTAATAGGGTACAACAGCAAAAGCAGTGAATCAAGTTGCAACAAGTGGAGGCAGCCAGCAAATCACAAAATCGATGGCGAAAGCTGTACGAGGGAAAGATATGCGAAGGTTAGCAATGGCATTCCAATTTCCATAAGGTGCAAGAAACTAGGAAACGAGGACTTAAGTGGACAAGAGGATCACCACAAGAGTAATTGGCTGCAACAGAGAATAATGGAACCATCGTCTCCCACAGAGGTTGGGATTGGAGCAAAGCGGCTTAAAGTGCGAGGCCCTTCGTTCCCGAGCTTGTAG 2811 0.4297 MRQNEGKGVFSFISLTNLKVGGSYPVQIGSSTEKVDTPLRIPDSRAFQNGRFVIVFVISTKWAKTEVHRELPRDEMVEGRVCLPREARKVLESLKRKRLHRATSSTANKTSVANMMTRSGGDALRASSSCGMRLHGNAEAFSKRKVDKFDMSDLEWIEKIPECPVYSPTKEEFEDPLVYLQKIIPVASRYGICKIISPLSASVPAGVVLMKEKAGFKFATRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPASFLEKEFWHEISCGKMETVEYGCDVDGSAFSSSPNDQLGSSKWNLKKLSRLPKSILRLLETVIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAPKTWYGIPGHAALEFERVVREHVYTNDILSSEGEDGAFDVLLGKTTLFPPNILLEYEVPVYKAVQKPGEFIVTFPRAYHAGFSHGFNCGEAVNFAIGDWIPLGAIASRRYAHLNRVPLLPLEELLCKEAMLLYTSLELEDSDFPSADSMFHSSIKISFTNLMRFQHCARWLLIKSGACTNVSLHSHGSILCSLCKRDCYVAYVDCDCHMHPVCLRHDIESLDFTCGSKHSLYLREDIEDMEAAAKKFEQEDGILDEIIKQIKTDNNMYSYPLSSMFQRAEADGYTPYGEIKFVPAVESSQSGSDLLMNVQECAIQSQWASRHYSGSEYHKSEVSDVSIFSAASALCSLSEPLECHSSTSKNDEGRANSGIVNSEELREGVSNSVCESLASPTRDHDSSIKPQGGDLYGLEMKSMAHVDSDDSDSEIFWVKRPSSLKAERRNGDDGMGPKHSDHQGLKRLKKNCDEGRSGQLIGYNSKSSESSCNKWRQPANHKIDGESCTRERYAKVSNGIPISIRCKKLGNEDLSGQEDHHKSNWLQQRIMEPSSPTEVGIGAKRLKVRGPSFPSL 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0486 936 PANTHER LYSINE-SPECIFIC DEMETHYLASE 155 841 - -
Acco12g0486 936 MobiDBLite consensus disorder prediction 805 824 - -
Acco12g0486 936 Gene3D Cupin 156 485 - -
Acco12g0486 936 ProSiteProfiles JmjC domain profile. 310 480 IPR003347 -
Acco12g0486 936 MobiDBLite consensus disorder prediction 893 922 - -
Acco12g0486 936 SUPERFAMILY Clavaminate synthase-like 241 496 - -
Acco12g0486 936 Pfam jmjN domain 164 196 IPR003349 -
Acco12g0486 936 SMART JmjN_1 162 203 IPR003349 -
Acco12g0486 936 SMART cupin_9 310 480 IPR003347 -
Acco12g0486 936 FunFam Lysine-specific demethylase isoform A 158 507 - -
Acco12g0486 936 ProSiteProfiles JmjN domain profile. 163 204 IPR003349 -
Acco12g0486 936 MobiDBLite consensus disorder prediction 723 766 - -
Acco12g0486 936 Pfam JmjC domain, hydroxylase 340 463 IPR003347 -
Acco12g0486 936 MobiDBLite consensus disorder prediction 723 773 - -
Acco12g0486 936 Pfam C5HC2 zinc finger 560 611 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0486 Acco-ChrAcco12 4304947 4313778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0486 160 630 JUMONJI Transcription Factor Family AT2G34880 32.423 4.44e-65 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Acco12g0486 JmjC 1e-38 CL0029