Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0484 ATGGAGCTATTTCCGGCACAGCCAGATTTGTCTTTGCAGATTAGTCCTCCGAACGCGAAACCCTCACCAGGATGGAGAAATAGTGGCTCACATCAAGAGCATCAGCTTGATTTGGGGTTTTGGAAGAGAGCTTTGGAGACCAGAACCTCATTGCTCTCTTCAATGCCTAAAACTATTACTGACTTTTTCGACCTTTCACTCTCCAATAATACTAATAGTCCCAATAACCCTTCAGTTTCTACCTCAGATCATCATCACCATCTTCATCTCTCTCACCGCTTCCAAAACGCCCCGTTTCAACAACACCCTCAAGACTTGGGATTTCTCAGACCCATCCGAGGAATCCCGGTGTACCAGAACCTTCCTCATCCTCATCCAACTTTCTCGCAGGTTCAGAATATAGATGCTTCCATTATTACATCTACAGTCAACAACACCTCGACCCCTTTTCCTTATCATAGTCCTAGTCAGGGTTTGATGAGGTCGAGGTTCTTGCCTCATCGTTTCCCTACAAAGCGCAGCATGAGAGCTCCCAGGATGCGTTGGACTACCACCCTTCATGCTCGCTTTGTTCATGCCGTTGAGCTTTTGGGTGGTCACGAAAGGGCTACACCCAAATCCGTTCTGGAGCTAATGGATGTCAAGGATCTCACTTTAGCCCACGTTAAATCCCATTTACAGATGTATCGGACGGTGAAAACCACAGATAGAGGTGCAGCAGCTTCTTCTACAGGCCAATCAGACGGATATGATAATGGATCATCTGGGGATACTTCTGAAGAATTAATGTTTGACATGAACAATCCTAGGCAGGGAAGACAAAGTGTTCACCAAGAAAAGGAATATCATGGCCTCTGGAGCAACTCTTCCAGAGAAGCTTGGTTGCATGGGAAGCCAAAGGAGACTGATTCTGTTGGAAACAACAATGTTAGTTCTCTTGAGAAAGAGAGAGTGTCAGAAGGAAGCTCATCGTCAAACATTTCAGGATCAAGCCCGAAGAAGCCTAATCTTGATTTGGAGTTCAGTTTGGGACAACCAATATGA 1044 0.4559 MELFPAQPDLSLQISPPNAKPSPGWRNSGSHQEHQLDLGFWKRALETRTSLLSSMPKTITDFFDLSLSNNTNSPNNPSVSTSDHHHHLHLSHRFQNAPFQQHPQDLGFLRPIRGIPVYQNLPHPHPTFSQVQNIDASIITSTVNNTSTPFPYHSPSQGLMRSRFLPHRFPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRGAAASSTGQSDGYDNGSSGDTSEELMFDMNNPRQGRQSVHQEKEYHGLWSNSSREAWLHGKPKETDSVGNNNVSSLEKERVSEGSSSSNISGSSPKKPNLDLEFSLGQPI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0484 347 MobiDBLite consensus disorder prediction 11 31 - -
Acco12g0484 347 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 346 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco12g0484 347 MobiDBLite consensus disorder prediction 1 31 - -
Acco12g0484 347 MobiDBLite consensus disorder prediction 302 335 - -
Acco12g0484 347 MobiDBLite consensus disorder prediction 235 264 - -
Acco12g0484 347 SUPERFAMILY Homeodomain-like 175 231 IPR009057 -
Acco12g0484 347 NCBIfam myb-like DNA-binding domain, SHAQKYF class 178 231 IPR006447 GO:0003677
Acco12g0484 347 FunFam Myb family transcription factor 176 234 - -
Acco12g0484 347 MobiDBLite consensus disorder prediction 297 347 - -
Acco12g0484 347 Gene3D - 177 234 - -
Acco12g0484 347 Pfam Myb-like DNA-binding domain 179 230 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0484 Acco-ChrAcco12 4276238 4280190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0484 1 346 G2-like Transcription Factor Family AT4G17695 40.270 1.14e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco12g0484 Myb_DNA-binding 1.6e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco12g0484 12 4276238 4280190 Acco12g0484 12 4276238 4280190 ECH