Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0473 ATGAAGGAAGGATCAGAGCAAGAAAAAGAAGCTCTTCGTCTCAAAGCCATGGCTGAATCCAAGTACAAAAGTTCCAGCCTCAGCTCTGCTTTGAAATATGCCAAGCGAGCCCAACGCCTTGCTCCTGACCTCGATGGTATCTCCGAAATGGTCACTTCCTTAGACATCCTCAGTGTGGCTTCCAAATCGCCCACTCCAGACTGGTACAAGATACTCCAGGTCGAGCCCTTTGCTCACTCCAACGTCATTCGGAAGCAGTACAAGAAGCTAGCTTTGATTCTTCATCCGGACAAGAATCCCCTTGCGGCTTCCGAGGAGGCGTTCAAGCTCGTTGGCGACGCGTTCCGATTTCTTTCTGATAAAATTCGGAGGAAGGAGTTTGATATGAAGCTGAGGATTCGGATTCAGGATGAGGCGACAGAGGGTTCGAAACAGCAGTTGGAGACCTTCTGGACGGCATGCTGCACTTGTCGACTTCTGCATCAGTTTGAGAGGAAGTATGTGGGTCATAATTTGGTTTGCCCTAGTTGTAAAAAGAGTTTCAAGGCTGTGGAGGTTGAGAATGGCAACGAGTCTGAGGAGGAGGAGGGGATGAGGGTTAGGAATAGAAGTAGGAAGTTGAAAGTTGCGAGCCTGATGAAGAAAGTTGATACTGTTGGTAAATCACGGACCGTGAAGGGGAAAGTGAGCGGTGAAGAGAATGAACCTGTGGCCACCAAGAATGGTAGATTAAAGGATAAAGTTGGAGGCGTTGAAGTGAGAAATGGGGAATTAGAGAGTGAAGGAGCTATTGGTAAATGGAGTGGGGGAAGATTGAGAAGTGGAGTCTTGAAGAGGAAAATGAGCACTGTCGGGGATGTGTTGGAAAGGTCCAAACCGAAGAAAATTAGAACTCGCGAGGAAACGATGACATTAGCGGAAATGCAGTCTGAAATCAAGAAAAAGGCTCAGGAAAAGAGGAAGATGACATTGAAGGTAAAGGAAAAGGAGGGGGATAAAACAGAGAAGGGGAAAGAGCAGGAGGAATTACAGAAGTATTTAAAAGGTTCTTGGGGTTCGGTGGCTGTCAAACCAAGAAGTTTCAAGAGCGGGAAGCTAGCAGCTGAGGAGAAGCAAGCATCTCTTGCTAAGAGTAAAGAATTGAGAACTGATAAGCACAGTAACTCTAGCGTAAGGGACAAGGAAAATATGGCAGTAGAGGATTCTGATTTTTATGATTTTGATAAAGCTAGAGTAGAGAGAAGCTTTAAGAAAGGCCAGGTATGGGCTGTATATGATGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGAAGTTATATCAGTAAATCCTTTTGAAGTAAGAATAAGTTGGCTAGATCTACAAAACAGTGGGGATGAAAAGTTAATTGGTTGGGACAAAAGGGGGTTCCATGTATCTTGTGGGAGATTTAAAGTTGCCAGGAAGACTTCCATAAATTCTGTAAATATCTTTTCCCATGTTGTAGATTGTGAACGGGCAGCTCGTGAAGTTTACATAATTTATCCAAAGAAGGGGTCTGTTTGGGCACTTTATAATGAGGCAGCTGCTGGTGTGGAGGGAAGAAGTGTTGCAGTTCAGAGCAAGTGGTGCTATGATATCGTTGTATTTTTGACGAGTTATAGTGAAATAACTGGATTAAGCATGGCATATCTGGGGAAAGTCAAAGGTTACAAGACAATATTCAAGAGACAAGAAATGGGGAGTCATGCTATTCGATATCTTGAAAGAGATTATTTCTGGTCAGTTTCACATCAAATTCCTGCACGGAAACTTTCTGGCATTGAAACTCCTGAACTTTTAAGAGACTCTTGGGAACTTGATCCTGCTTCACTTCCGTCAGATTTACTTGGGCTTAATTAG 1887 0.4372 MKEGSEQEKEALRLKAMAESKYKSSSLSSALKYAKRAQRLAPDLDGISEMVTSLDILSVASKSPTPDWYKILQVEPFAHSNVIRKQYKKLALILHPDKNPLAASEEAFKLVGDAFRFLSDKIRRKEFDMKLRIRIQDEATEGSKQQLETFWTACCTCRLLHQFERKYVGHNLVCPSCKKSFKAVEVENGNESEEEEGMRVRNRSRKLKVASLMKKVDTVGKSRTVKGKVSGEENEPVATKNGRLKDKVGGVEVRNGELESEGAIGKWSGGRLRSGVLKRKMSTVGDVLERSKPKKIRTREETMTLAEMQSEIKKKAQEKRKMTLKVKEKEGDKTEKGKEQEELQKYLKGSWGSVAVKPRSFKSGKLAAEEKQASLAKSKELRTDKHSNSSVRDKENMAVEDSDFYDFDKARVERSFKKGQVWAVYDDDDGMPRNYALIDEVISVNPFEVRISWLDLQNSGDEKLIGWDKRGFHVSCGRFKVARKTSINSVNIFSHVVDCERAAREVYIIYPKKGSVWALYNEAAAGVEGRSVAVQSKWCYDIVVFLTSYSEITGLSMAYLGKVKGYKTIFKRQEMGSHAIRYLERDYFWSVSHQIPARKLSGIETPELLRDSWELDPASLPSDLLGLN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0473 628 Gene3D DnaJ domain 56 156 IPR036869 -
Acco12g0473 628 CDD DnaJ 67 120 IPR001623 -
Acco12g0473 628 PRINTS DnaJ domain signature 69 87 IPR001623 -
Acco12g0473 628 PRINTS DnaJ domain signature 103 123 IPR001623 -
Acco12g0473 628 PRINTS DnaJ domain signature 87 102 IPR001623 -
Acco12g0473 628 SMART dnaj_3 66 123 IPR001623 -
Acco12g0473 628 Pfam Domain of unknown function (DUF3444) 395 602 IPR024593 -
Acco12g0473 628 SUPERFAMILY Chaperone J-domain 62 132 IPR036869 -
Acco12g0473 628 Coils Coil 305 325 - -
Acco12g0473 628 PANTHER BNAC03G44070D PROTEIN 7 621 - -
Acco12g0473 628 MobiDBLite consensus disorder prediction 374 393 - -
Acco12g0473 628 Pfam DnaJ domain 67 128 IPR001623 -
Acco12g0473 628 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0473 Acco-ChrAcco12 4150021 4151907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0473 1 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.353 2.28e-30 120