Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0472 ATGGACAAAGCTTCTAATGACAAGGAGCCCAAGACTCCTTCTGCTACGTCACAGGAGCAGCCTTCAACCACCAGCAGTGGAGCAATAAATCCTGACTGGTCTAGCTTTCAGACGTATTCTCCTATGCCTCCACATGGATACTTGGCATCAAGTCCGCAAGCCCATCCATATATGTGGGGCGTCCAGCCTATTATGCCTCCCTACGGTACTCCGCCACATCCTTATGTTGCAATGTATCCCCCTGGCGGCATATATGCTCATCCAACAATGCCTTCGGTCACAGGATCTTATCCTTTTAGTCCTTTTGCCTTGCCTACTTCCAATGGTATTGCTGAGGCTTCAGGAAATACACCTGGCAGCATGGAAGGTGATGCTAGGCCTCCTGAGGTGAAGGAAAAATTACCAGTAAAAAGATCAAAAGGAAGTTTGGGCAATTTGAATATGATCACAGGGAAGAATAATGATCTTAGTAAAAACCCAGGGACTTCAGCTAATGGAATTCATTCAAAAAGTGGTGAGAGTGCAAGTGAAGATACAAGTGAAGGAAGCGATGCAAATTCTCAAGATGACTCTGAGTTCAGATCAGGAGGCAGGCATAATTCCTTGGAAGCTGAACCACTTCAAAATGGAAGTTCAGTGCTTGCTCCTCAAAATGGGGGAGTTAACACCCATCATAAGGTAAATCAACCTATGCCTATCTCTGCCGCTGGTGTTCCTGGTCCCACAACAAACCTAAATATCGGAATGGATTACTGGGGAGCACCAACTTCTGCAATTCCTGCAATGCACGGAAAGGTTCCTTCTACTGCAGTTGCTGGGGGAATGGTTAGTGCTGGATCACGGGATGGTATTCAGTCACAACTTTGGGTTCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAGTCCAATAGAGAATCAGCTCGCAGATCCAGGTTGCGCAAGCAGGCAGAGTGCGATGAACTAGCACAGCGTGCTGAGGCCTTGAAAGAAGAAAATGCTACTCTTCGGTCAGAAGTGAATCGGATTAAGAGCGAGCATGAACAGTTGCTTGCTGAGAATGCTGCACTCAAGGAGAGACTTGGGGAATTTCCTGAGAAAGAAGATTTTAGGTCAGGCCAGAATGATGAAAATGCAAGTAACGAATCTCAACAGACTGGGCAGGAGGAGGCTGTGAAGGGTGATCAGTAG 1194 0.4665 MDKASNDKEPKTPSATSQEQPSTTSSGAINPDWSSFQTYSPMPPHGYLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPPGGIYAHPTMPSVTGSYPFSPFALPTSNGIAEASGNTPGSMEGDARPPEVKEKLPVKRSKGSLGNLNMITGKNNDLSKNPGTSANGIHSKSGESASEDTSEGSDANSQDDSEFRSGGRHNSLEAEPLQNGSSVLAPQNGGVNTHHKVNQPMPISAAGVPGPTTNLNIGMDYWGAPTSAIPAMHGKVPSTAVAGGMVSAGSRDGIQSQLWVQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVNRIKSEHEQLLAENAALKERLGEFPEKEDFRSGQNDENASNESQQTGQEEAVKGDQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0472 397 MobiDBLite consensus disorder prediction 377 397 - -
Acco12g0472 397 CDD bZIP_plant_GBF1 298 348 IPR045314 GO:0003700|GO:0006355
Acco12g0472 397 Gene3D - 296 350 - -
Acco12g0472 397 MobiDBLite consensus disorder prediction 143 182 - -
Acco12g0472 397 Pfam bZIP transcription factor 293 355 IPR004827 GO:0003700|GO:0006355
Acco12g0472 397 SUPERFAMILY Leucine zipper domain 296 352 IPR046347 GO:0003700|GO:0006355
Acco12g0472 397 MobiDBLite consensus disorder prediction 202 229 - -
Acco12g0472 397 MobiDBLite consensus disorder prediction 359 397 - -
Acco12g0472 397 MobiDBLite consensus disorder prediction 1 44 - -
Acco12g0472 397 Pfam Disordered region downstream of MFMR 132 258 - -
Acco12g0472 397 MobiDBLite consensus disorder prediction 10 41 - -
Acco12g0472 397 MobiDBLite consensus disorder prediction 109 237 - -
Acco12g0472 397 PANTHER G-BOX-BINDING FACTOR 3-RELATED 9 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Acco12g0472 397 Coils Coil 313 361 - -
Acco12g0472 397 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 295 358 IPR004827 GO:0003700|GO:0006355
Acco12g0472 397 MobiDBLite consensus disorder prediction 359 376 - -
Acco12g0472 397 Pfam G-box binding protein MFMR 3 91 IPR012900 -
Acco12g0472 397 SMART brlzneu 293 357 IPR004827 GO:0003700|GO:0006355
Acco12g0472 397 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 300 315 IPR004827 GO:0003700|GO:0006355
Acco12g0472 397 MobiDBLite consensus disorder prediction 289 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0472 Acco-ChrAcco12 4142308 4148325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0472 1 393 bZIP Transcription Factor Family AT2G35530 62.963 1.24e-162 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco12g0472 MFMR_assoc 2.5e-44 No_clan