Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0469 ATGGGTTACGAAAACGATCCGTATCGTGATGACGATGGAGAACCCTTGATGGACTATGATGACGTGCAATCCGATCGCGAGCTCTCGCCTGAACCCCAACAGCAAGGTCTATTCGACGATTTGGAGGAAGACGTCGATGATTGGCGCGGGCGAGAAAGATCTCAGACTCCGGTCTACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGAAAGAGGCTTATTAAGAAAGGTGACACTGGGAGCCAGTCTGTGGCTCCAGAGCTTGCTGACGAGGATGAGGAAGCCGATGGTAATATTCCGGCAAGTTTTGTGAGGGACGGATCAGAGGAGGGGGAAGGAAGAAAGAGGAAGGGGAAGGATGGTGGCAGTGGGAAGAAGGAGAAGAGGCATAAGGGGGAGAAGAGGCTAGGGAGTAGTGGTAAGGGCGGCTCTAAATCTGGGCCGTCGAAGAAAGCTTTTGCGCCTAAGGCAGGAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCCGGCGCTGACTCTGAGGATGATCAAGAGGGTGTCAGGACAGTCGATGATGATAATTTCATAGATGACACAGGGGTGGAGCCTGCTTTATACGGTAGTGATAATGAAGCTCATTCTCCTAGTAGATATGCCCAGGCAGAGGAAGTTGAGGAGGATGATGAGATCAAGGAACTTTTCAAGATGGGTAAGAAGAAGAAGAAGAATGAGAGAAGCCCTGCTGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCCGAAGAGGATGCTGAATTAAATAGACAGGGGAAGCCTGCCATAAATAAGCTGAAGAAGTTGCCTCTTTTAACTGAAGTCCTTGCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGAGTACTAACTTTATTGAAGAATTGGCTTGAACCCCTCCCAGACGGAAGCTTGCCAAACATTAACATCCGCTCAGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTACGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAATCAGTTTAAATAGGAAACTAGCTAAGGAGCTGGTTGATAAATGGAGCCGACCCATATTTAACAAGAGTACAAGATTCGAAGACATGAGAAATGTGGAGGAAGACAGGATTCCTTTCAGAAGGCCTTCAGTGAAGAAGCCTGTAAATAAAGCGTCAGGAATTGAATCCAGAGATGGTGACCTTGAATTAGAATTTTCACAGCGAAAGTCTGGACAATCATCTTCTAGACAACTTACCACTAGACCAGAAGCAACACCATTGGATTTTGTGGTGCGGCCCCCATCTAAAGTTGACCCAGAAGAGATTAGGGCCCGCGCAAAACAAGCTGCACAAGATCAACACCGAATGAAGATGAACAAGAAGCTTCAAAATTTGAGGTTACCGAAAAAGAGGCAGCTTCAAGCCACGAAGTTGAGTGTTGAAGGTCGAGGAATGACCAAGTATCTGTAA 1551 0.4558 MGYENDPYRDDDGEPLMDYDDVQSDRELSPEPQQQGLFDDLEEDVDDWRGRERSQTPVYDNDSSMSKAKPRKRLIKKGDTGSQSVAPELADEDEEADGNIPASFVRDGSEEGEGRKRKGKDGGSGKKEKRHKGEKRLGSSGKGGSKSGPSKKAFAPKAGKDHDGDVKEMWDTIAGADSEDDQEGVRTVDDDNFIDDTGVEPALYGSDNEAHSPSRYAQAEEVEEDDEIKELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLAKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRSAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISLNRKLAKELVDKWSRPIFNKSTRFEDMRNVEEDRIPFRRPSVKKPVNKASGIESRDGDLELEFSQRKSGQSSSRQLTTRPEATPLDFVVRPPSKVDPEEIRARAKQAAQDQHRMKMNKKLQNLRLPKKRQLQATKLSVEGRGMTKYL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0469 516 Coils Coil 252 272 - -
Acco12g0469 516 MobiDBLite consensus disorder prediction 155 193 - -
Acco12g0469 516 MobiDBLite consensus disorder prediction 433 449 - -
Acco12g0469 516 MobiDBLite consensus disorder prediction 1 223 - -
Acco12g0469 516 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 245 392 IPR035441 -
Acco12g0469 516 PANTHER PROTEIN IWS1 HOMOLOG 1 1 516 IPR044204 GO:0009742|GO:0032784
Acco12g0469 516 ProSiteProfiles TFIIS N-terminal domain profile. 306 389 IPR017923 -
Acco12g0469 516 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 299 389 IPR035441 -
Acco12g0469 516 MobiDBLite consensus disorder prediction 418 432 - -
Acco12g0469 516 Pfam TFIIS helical bundle-like domain 332 386 IPR017923 -
Acco12g0469 516 MobiDBLite consensus disorder prediction 410 467 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco12g0469 Med26 5.8e-13 No_clan