Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0464 ATGCGAGGTTCTAAATTGCTCAGTTCAACAATTGCTCGAGGTGTTAGCAGAGAATTTTTTCAAAGGCATTTTAATATTTATAGCCCGGAGAAGGTTTTTCAATCTATTTTCTCTGAAGGGAACAAATCAAATACGTCATTTATCAAAAGTGGAACTTTTGGTTTTGCCCATTTGATGGATTTGTCCCCGCAAGAAGTGATGTTTTCAGCTACTGGTTCTTTTATGGAGCAAGTACTGTTTTCTATGGTGAGATGGGAACAGAAATTTATCAACGAAGTTGTGGACTTGATAACGGAGACTATAGATAATGATCCTGAAAGCTGTTACATTGAAAGAGGAAAAGTGAGGGCTGTTTCCCGAATGTTATTGGTGCCAACAAAATCTGAGGCTAAGATTTTTCAAAGAAGATTTGCTACTGGCCCTAGTCATGCCCCTAGGCATTGGTTGTCCCATATCAAGATAGGAGTATATCAAATGCAAGACTTATTCACTCAGCATATTCATATATCCCTCGGACCAGAGCTCCACCGGTTGCTTGTGGGATTTGCGCGTACATCTGAGTTTAATGGACCTAGAAAGCCAGATGGTCCTCCCCATCATTTAATTCAAGAGATTGATTTGGAACTACCAGCTGCAAAGCCTGCTCTTCAGTTAACCTACAAAATTTTAGGTTCGTCTCCCCCTGTGCAAAATTTAGACCTAGCGAAATTGCTTACTGGCTCTGGGAAGCTTCAAACGCTTGATGTACTATTACAACGCTTGCGGGCTGAAAACCATCGTGTTCTCTTGTTTGCTCAGTTGGTTAAGATGATGAATATTCTTGAGCCGCAGGACTACATGAACTATAGAAAATATAAATATTTTAGAATTGATGGATCGACAGATGCTCCGGATCGTCATGATTTGGTTAGAAACTTCCAGCAGACGAATGATGTTTTTGTGTTCTTACTTAGTACAAGAGCTGCTGCATTGGGGATCACCTTGACGGCTACTGGCACGGTCACTGTTTACAGACTTTTATGTAAAGAGACAATTGAAGAGAAGATTCTTCTAAGAGCCAGGCAAAAAAGCACTGTACAGAACCTCGCCATGACTGGTAATTCTGATGGTGATGATACTTATACTCGTGATGATGTTCTATCTTTGCTTCTGGATGATGCGCAACTGGAGCAGAAATTCAAGGGAATTCCTCCTCAGGTAAAGGATAAGCAGAAGAGGAAACAAACTGTGAAGGGTATACGGGTAAATGAAGAAGGTGATGCGTATCTCGAAGATCTCACAAACTCTGGAGCACAGGGCCCAGATAATGATATTTCTCCTGACCCAGAGGAATCAAAGCCCATTAATAAAAAGAGAAAAGCTGTGTCTTACAAGCACACCGCATCAAGGGCAAGGAATTTTCAAAATACTGATCCAGCGGTCCAGAAACCTAAGAGACTAGAGAAGGCAAAGAAGTTGGAAATGACAGGTTTGACCAATTAA 1482 0.4109 MRGSKLLSSTIARGVSREFFQRHFNIYSPEKVFQSIFSEGNKSNTSFIKSGTFGFAHLMDLSPQEVMFSATGSFMEQVLFSMVRWEQKFINEVVDLITETIDNDPESCYIERGKVRAVSRMLLVPTKSEAKIFQRRFATGPSHAPRHWLSHIKIGVYQMQDLFTQHIHISLGPELHRLLVGFARTSEFNGPRKPDGPPHHLIQEIDLELPAAKPALQLTYKILGSSPPVQNLDLAKLLTGSGKLQTLDVLLQRLRAENHRVLLFAQLVKMMNILEPQDYMNYRKYKYFRIDGSTDAPDRHDLVRNFQQTNDVFVFLLSTRAAALGITLTATGTVTVYRLLCKETIEEKILLRARQKSTVQNLAMTGNSDGDDTYTRDDVLSLLLDDAQLEQKFKGIPPQVKDKQKRKQTVKGIRVNEEGDAYLEDLTNSGAQGPDNDISPDPEESKPINKKRKAVSYKHTASRARNFQNTDPAVQKPKRLEKAKKLEMTGLTN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0464 493 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 246 404 IPR001650 -
Acco12g0464 493 CDD SF2_C_SNF 241 334 - -
Acco12g0464 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 388 IPR027417 -
Acco12g0464 493 Pfam Helicase conserved C-terminal domain 243 339 IPR001650 -
Acco12g0464 493 Gene3D - 212 332 IPR027417 -
Acco12g0464 493 Gene3D - 333 421 IPR027417 -
Acco12g0464 493 MobiDBLite consensus disorder prediction 394 493 - -
Acco12g0464 493 PANTHER HELICASE SRCAP-RELATED 333 449 - -
Acco12g0464 493 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0464 Acco-ChrAcco12 4072621 4076255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0464 232 352 RAD5 or RAD16-like Gene Family AT5G22750 25.620 4.72e-09 57.0