Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0458 ATGGCAGCTTGCACAGTGTACACAACAACACAATCTCTCAACACAAAATGCTACATCTCATCTTCATCAAAATCACATTTGGGTTATTTTCCTCAGAAACAGCAGCTAGTTATCTTCGGGAGAAGAAGCAGCCCATGTGCGATAACATGTCGTGCAGCAGCAGATGATCATGAGCAGACGGTGGTGATTGGTCTAGCTGCTGATTCAGGCTGTGGAAAGAGCACATTCATGAGGAGACTAACAAGTGTGTTTGGAGGAACAGCAGAACCACCAAAAGGAGGGAATCCAGATTCCAACACTCTAATCAGTGATACCACAACAGTTATTTGCTTAGATGATTATCATTCATTGGACAGAAATGGAAGGAAAGAGAAAGGGGTCACAGCACTTGATCCAAGAGCCAATGATTTTGATCTCATGTATGAACAAGTCAAGGCACTTAAGGATGGAGTTTCTGTGGCGAAACCTATTTATAATCATGTCACTGGTCTCTTGGATCCTCCTGAGCCCATCAAGCCTCCCAAAATCTTGGTCATTGAAGGTTTGCATCCAATGTTTGATCCTCGGGTGAGAGAACTGTTGGACTTCAGTATCTACTTGGACATCAGCAATGAAGTGAAATTCACTTGGAAAATTCAGAGAGACATGGCAGAGCGAGGGCACAGCCTTGAAAGCATCAAAGCTAGCATTGAAGCTCGGAAACCTGATTTTGAAGCTTATATTGATCCTCAGAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACACAGCTCATTCCAGATGATAATGAAGGAAAGATTTTAAGAGTGAGATTAATACAGAAAGAAGGGGTTAAGCATTTTAGCCCTTCTTACTTGTTTGATGAAGGATCTACCATTTCCTGGATACCATGTGGCAGGAAGCTAACTTGTTCTTATCCTGGCATTAAATTTTCCTATGGACCAGAGACTTACTATGGCCATGAGGTATCAGTTGTGGAGATGGATGGGCGATTTGACAAATTAGATGAACTGATTTATGTTGAGAGCCATCTCAGTAACCTGTCAACAAAATTCTATGGAGAGGTCACACAACAGATGTTGAAACATGCTGATTTCCCAGGAAGCAACAATGGGACAGGTCTTTTCCAGACCATAATTGGTTTGAAGATTAGAGATTTATATGAACAAATAATATCCGCAGCCAAGACTCCAGTAGCCACAGCACAAGCCTAG 1218 0.4212 MAACTVYTTTQSLNTKCYISSSSKSHLGYFPQKQQLVIFGRRSSPCAITCRAAADDHEQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRNGRKEKGVTALDPRANDFDLMYEQVKALKDGVSVAKPIYNHVTGLLDPPEPIKPPKILVIEGLHPMFDPRVRELLDFSIYLDISNEVKFTWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPSYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPETYYGHEVSVVEMDGRFDKLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIIGLKIRDLYEQIISAAKTPVATAQA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0458 405 Gene3D - 57 290 IPR027417 -
Acco12g0458 405 ProSitePatterns Phosphoribulokinase signature. 211 224 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco12g0458 405 CDD PRK 62 351 - -
Acco12g0458 405 Pfam Phosphoribulokinase / Uridine kinase family 62 260 IPR006083 GO:0005524|GO:0016301
Acco12g0458 405 PANTHER URIDINE KINASE 56 302 - -
Acco12g0458 405 FunFam Phosphoribulokinase 57 287 - -
Acco12g0458 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 331 IPR027417 -
Acco12g0458 405 PRINTS Phosphoribulokinase family signature 67 84 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco12g0458 405 PRINTS Phosphoribulokinase family signature 229 252 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco12g0458 405 PRINTS Phosphoribulokinase family signature 211 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Acco12g0458 405 PRINTS Phosphoribulokinase family signature 176 194 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0458 Acco-ChrAcco12 4000382 4002740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0458 114 252 PRT Gene Family AT3G27440 29.577 9.13e-17 79.7