Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0448 ATGGAGCACTACCAAACAGACAATGTTTTTCGTTTCGTTCTTAGATTCAGTGGGTGGCACTGGGTGCACACAATTCCTGTGCATCATGGAAAATCGAAGGGTGTTGTTGAGGTGAGAGTGATGGAGAGGGGTTATGAAGGAGGAGGGAATTTTGGGTTTGAGGATGCCGTGGTGATGACCAGAGATCCAAAGCCAAGGCTGAGATGGACGGCTGATCTTCATGATCGATTTGTGGATGCCGTCACCAAGCTTGGTGGCCCCGACAAAGCGACTCCCAAGTCTGTGTTGAGGTTGATGGGCTTGAAAGGCTTGACTTTGTATCATTTGAAGAGTCATTTGCAGAAATATAGACTTGGACAGCAGGCAAGGAAGCAAAACACTGAAGAACAACACAAAGAGACCAATAATAGAGATGCATATGTACATTTTAGTGATCGTTCGGGGCCTGACACCAATCACAGAGGCAATAACCAAACAGAGGAAATCCCATTAGCAGAGGCATTGAAGCGTGGGATCGAAGTCCAGAAGCAACTGGAAGAGCAGCTTGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCCATGCTAGAGAAAGCACAGAAGAGCCTTTCCCTTGACATGAATGGGCCAGACAACAACCTAGAAGCAGCAAGAGCTCAATTGACAGATTTCAACTCGGCTTTGTCCAATTTTATGGAGAATATGAACAGAGACAACAAAGAAAACATCATGGACATGAATGATTTCTACAAGAAGGCTCACAGTTCATCGGCTTTCGGAACATACCAGGAAGCAGACGGAGAAGACCAAAAGGATCAAAAGCCTAAGGTTGAAGAAGGTTCAATACAGTTTGACTTAAACATCAAAGGCAGCTATGACTTTGTTTCAGCAAGTGCGGCTGAAATGGATTCCAAGGTACTTTCATACAGAGTGTAA 957 0.4472 MEHYQTDNVFRFVLRFSGWHWVHTIPVHHGKSKGVVEVRVMERGYEGGGNFGFEDAVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNTEEQHKETNNRDAYVHFSDRSGPDTNHRGNNQTEEIPLAEALKRGIEVQKQLEEQLEVQKKLQMRIEAQGKYLQAMLEKAQKSLSLDMNGPDNNLEAARAQLTDFNSALSNFMENMNRDNKENIMDMNDFYKKAHSSSAFGTYQEADGEDQKDQKPKVEEGSIQFDLNIKGSYDFVSASAAEMDSKVLSYRV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0448 318 Pfam Myb-like DNA-binding domain 67 117 IPR001005 -
Acco12g0448 318 NCBIfam myb-like DNA-binding domain, SHAQKYF class 64 119 IPR006447 GO:0003677
Acco12g0448 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 121 IPR017930 -
Acco12g0448 318 FunFam Myb family transcription factor 63 121 - -
Acco12g0448 318 Pfam MYB-CC type transfactor, LHEQLE motif 163 209 IPR025756 -
Acco12g0448 318 Coils Coil 175 195 - -
Acco12g0448 318 Gene3D - 63 121 - -
Acco12g0448 318 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 53 272 IPR044848 GO:0003700
Acco12g0448 318 SUPERFAMILY Homeodomain-like 64 121 IPR009057 -
Acco12g0448 318 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0448 Acco-ChrAcco12 3898405 3902723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0448 45 231 G2-like Transcription Factor Family AT4G13640 50.256 4.40e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco12g0448 Myb_DNA-binding 2.6e-07 CL0123