Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0435 ATGGCCGCACTGCTTCTGTCTCTCTCCCACTCCGAGGTGACCGCTCCTCTCTCTCTCTCTCTCTTAAGCATAACGACGTACTACAAGAAGAACAAGGAGATCGAAATGAATTCTTCGCCGATGTGGACGGCGGTCCAACCACCGTTCACGGTGGCGCAATGGCAGGAGCTTGAACACCAAGCTCTCATCTTCAAGTACCTCAAGGCTGGGCTGGCCGTTCCTCTCGACCTCCTCATTCCCATTCGCAAGAGCCTTGAATTGATGCAGCCGAAGCTTGTTCATCACCCGTCTTTGGGTTATTGCTCTTATTACGGGAAGAAGATCGACCCAGAGCCGGGGAGGTGTCGAAGGACGGATGGGAAAAAATGGAGATGCTCGAGAGATGCGCATCCGGACTCGAAATACTGTGAACGGCACATGATACGCCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCGCAACAAGCTGCTTCTCAGTCTTCGTCCAATTTGGCATCGGACGTTGCTGCTGCTGGGAGCAGACGCTCTGGAAGCTTCCAGAGCTTGGCCTTGCACGGAAATGGTGCTCGTGAGGGTTTGAACCTTGAAAATAACGTACCACAGTTTCAGATACAGTCTCTTCCTAGTGAGATTAGCAAGAAAGATTACAGGTTCGGACTGAATTCTGAAGTGGATGAGCACAACTTCTTACAGAAAGGATTGGGAAGCACGAGCTATCTCAGTTTTGACTCTGCCTCAGACACCATGTGGCCTCATATCTCACAAGTTCCCTCAGACATTGTCTCGGAGTCAAGAAATAGTTCTACCATTGTTAGCAGCTGCTTCCAGCTGGGGACTGTTCGGGATGCTGAGCCACCGAATTTAAACACTGCAAGATCAAAGCAACATTTCTATGGCGATCAGCTTAGTTTGTCTGGTTGTTTGAAACAGGAATATCATCAGTCCCCACAGACGACTTTTTCAACCGACTGGCTCTGGAAGAATTCAAGCTCCCCTTCTGTTGAGTATAGATCCAATAAAGACTCTAGCTGTAATTCTGATAGTATGAATCCCTTTCAGTGA 1062 0.4896 MAALLLSLSHSEVTAPLSLSLLSITTYYKKNKEIEMNSSPMWTAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPIRKSLELMQPKLVHHPSLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESQQAASQSSSNLASDVAAAGSRRSGSFQSLALHGNGAREGLNLENNVPQFQIQSLPSEISKKDYRFGLNSEVDEHNFLQKGLGSTSYLSFDSASDTMWPHISQVPSDIVSESRNSSTIVSSCFQLGTVRDAEPPNLNTARSKQHFYGDQLSLSGCLKQEYHQSPQTTFSTDWLWKNSSSPSVEYRSNKDSSCNSDSMNPFQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0435 353 ProSiteProfiles QLQ domain profile. 48 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco12g0435 353 PANTHER GROWTH-REGULATING FACTOR 5 36 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Acco12g0435 353 Pfam WRC 110 152 IPR014977 -
Acco12g0435 353 MobiDBLite consensus disorder prediction 151 169 - -
Acco12g0435 353 Pfam QLQ 48 82 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco12g0435 353 ProSiteProfiles WRC domain profile. 109 153 IPR014977 -
Acco12g0435 353 MobiDBLite consensus disorder prediction 146 169 - -
Acco12g0435 353 SMART QLQ_2 47 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco12g0435 353 MobiDBLite consensus disorder prediction 329 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0435 Acco-ChrAcco12 3784425 3787232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0435 34 155 GRF Transcription Factor Family AT3G13960 54.762 1.50e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco12g0435 WRC 1.4e-19 No_clan