Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0422 ATGATGGGGAAGAAGAGCGAGAATGAGAATTCATCAGGAGGTCGAGAGTTCAATGCAAATGGAAATCGAATGAATACTGCAGAAGTTGAAGCCAAACTTGACCAAGGAAATGTTGAAGCCGCTGAATCTGCATTGAAAGAGGGCTTATCTATCACTTCTGAGGAAGCAAGAGTTCTTATCGGGAAGCTAGAGTATCAAAGAGGAAATTATGCAAGTGCTCTTTGCGTGTTTGATGGAGTTGATCTCCAAGCTGCCCTTCAGCAATTACAATCGTTAATTTCTGACAAATCGTTGGCCAAGAAAGCACGCCCTCGCGCTGAATCACCTACCTTAATCCCTAGGCATGCTGCTAGTTTGATGCTTGAATCTATCTACTTCAAAGCAAAAGCTCTACGAAAGCAGGGGAAAATATCTGAAGCTACCACTGAATGCAAAACTGTGCATGAGGGTATTGAGAAGGCCTTCAGTCAGGGTGTATCGGATATTCAATTGGACAACACCTTGCAAGAAGTAGTCAGTGACATTGTAGGACTTCTTCCAGAGCTTAAAAAGCAAGCAGGTAACTATCAAGAGGCATTGTCTGATTATAGGCATGCTCTTCTACTTCTGAGGCAATGGAACTTTGATACTGATGGCTGTGCTAGAGTTCAGAAAGGACTTGCCATGCTTTTGCTGTACGGTGGGTTCGAGGCTAGCTCACCCAAGGCGGTTGATCAGCATGAGGGGTTTTATGTACCTAAAAACAATCTGGAAGAGGCAATTCTGCTTCTAATGCTTGCTGTGAGGAGACTTTGCATTGATAAGTCCAAGTGGGATCCTTCAGTGATGGAGCATCTGATTTTTGCACTTTCTGCATGTGGCCAAACTTCTGTTCTGGCAAAGCAACTTGAAGAGTTAATGCCTGGATTATATCATCGTATTGATCGTTGGAATCTTTTAGCTTTATGTCTCCAGGCAGCAGGACAAAACGAAAGTGCTTTGGATCTACTTAGGAAGTCTTTGCACAAACATGAGAGACCAAATGACATTAAATCATTGTTAGTAGCTGCCAGGATCTGCAGTGAGAAACCTTGCCTTGCTGCTGAGGGAGTGGAGTATGCTCAAAGGGCAATCAATAATGCTAAGGGCAAAAACGAGCATTTGAAAGGTGTGGGTCTTAGAATGCTGGGACTTTGTCTTGGAAAGCAAGCTAAGGTTGCTTCCTCGGACTTTCAAAGGGCTAATCTTCAGTCTAAAGCTCTGAAATCATTAGAAGGGGCGATGGGATTTGAGCATAACAATTCTGATCTGATTTTTGAGCTGGCAGTTCACTATGCAGAACACAGAAATTTGACAACTGCTTATCGCTATGCAAAGCAGTTCTTTGATGAAACGGGAGGATCTATATTGAAAGGTTGGAGATTGATTGCTCTGATTTTGTCTGCTGGACAACGATTCACGAACGCTGAAGAGGTGATAGAGCGAGCTTTACATGAGACCGCAAGATGGGAGCAAGGGCCACTGCTTAGACTGAATGCAAAGTTCAATTTCCAATCACAACCCCAGAAAGCTATTAATACTTATAAATGCCTCCTTTCATTAATTCAAGCTCAAAAGAATTCCTTTGGGCCTATGAAAATAAATACACAGGTTCAAGATGATGTGAAGGAAATTGATGTTTGGCATGGTCTGGCAACTTTATATGCAAGCCTTTCTCGTTGGGGGGACGCTGAAGTTTGTTTGCAAAAGGCCAGAGAATTTAAGGAGTACTCAGCGGAAACAGTGCACATTGAAGGTCTTTTGTGTGAAGGACGTAGACAAAAACAAGAAGCTATTTCTGCTATCACGAAAGGGCTCCTGTTTGAACCACGCTATGTTCCAAGCAAGATTCAGATGGGTGTTTTACTACTGAAAATGAATTCAAAGTCAAAATCTTTGCCTTTAGCCAGAAGCTTGCTTTCTGATGCACTTCGATTTGAACCCACTAACCGCATGGCTTGGTTTCACTTGGGAAAAGTTCACAAGTATGATGGCCGAATAGGTGATGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCTGACCCTCTTGAAAGTTTCAGCACTTTGCTGTGA 2100 0.43 MMGKKSENENSSGGREFNANGNRMNTAEVEAKLDQGNVEAAESALKEGLSITSEEARVLIGKLEYQRGNYASALCVFDGVDLQAALQQLQSLISDKSLAKKARPRAESPTLIPRHAASLMLESIYFKAKALRKQGKISEATTECKTVHEGIEKAFSQGVSDIQLDNTLQEVVSDIVGLLPELKKQAGNYQEALSDYRHALLLLRQWNFDTDGCARVQKGLAMLLLYGGFEASSPKAVDQHEGFYVPKNNLEEAILLLMLAVRRLCIDKSKWDPSVMEHLIFALSACGQTSVLAKQLEELMPGLYHRIDRWNLLALCLQAAGQNESALDLLRKSLHKHERPNDIKSLLVAARICSEKPCLAAEGVEYAQRAINNAKGKNEHLKGVGLRMLGLCLGKQAKVASSDFQRANLQSKALKSLEGAMGFEHNNSDLIFELAVHYAEHRNLTTAYRYAKQFFDETGGSILKGWRLIALILSAGQRFTNAEEVIERALHETARWEQGPLLRLNAKFNFQSQPQKAINTYKCLLSLIQAQKNSFGPMKINTQVQDDVKEIDVWHGLATLYASLSRWGDAEVCLQKAREFKEYSAETVHIEGLLCEGRRQKQEAISAITKGLLFEPRYVPSKIQMGVLLLKMNSKSKSLPLARSLLSDALRFEPTNRMAWFHLGKVHKYDGRIGDAADCFQAASMLEESDPLESFSTLL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0422 699 SUPERFAMILY TPR-like 295 529 IPR011990 GO:0005515
Acco12g0422 699 SUPERFAMILY TPR-like 511 687 IPR011990 GO:0005515
Acco12g0422 699 PANTHER PROTEIN NPG1 7 696 IPR043376 -
Acco12g0422 699 SMART tpr_5 173 206 IPR019734 GO:0005515
Acco12g0422 699 SMART tpr_5 551 584 IPR019734 GO:0005515
Acco12g0422 699 SMART tpr_5 307 340 IPR019734 GO:0005515
Acco12g0422 699 SMART tpr_5 585 618 IPR019734 GO:0005515
Acco12g0422 699 SMART tpr_5 463 496 IPR019734 GO:0005515
Acco12g0422 699 SMART tpr_5 657 690 IPR019734 GO:0005515
Acco12g0422 699 Gene3D Tetratricopeptide repeat domain 23 398 IPR011990 GO:0005515
Acco12g0422 699 Gene3D Tetratricopeptide repeat domain 399 696 IPR011990 GO:0005515
Acco12g0422 699 MobiDBLite consensus disorder prediction 1 23 - -
Acco12g0422 699 SUPERFAMILY TPR-like 185 339 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0422 Acco-ChrAcco12 3674443 3678468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0422 1 699 Calmodulin-binding Proteins AT2G43040 60.255 0.0 833