Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0419 ATGGTTAAGCACAATAATGTTATCCCTAGTAGCCACTTCAGGAAGCACTGGCAGAACTACGTTAAGACGTGGTTCAATCAACCAGCACGGAAGACAAGAAGACGACTAGCTCGCCAAAAGAAAGCTGTTAAGATTTTCCCTAGGCCTACAGCTGGGCCTCTTAGACCTATTGTTCATGGCCAGACTTTGAAGTACAACATGAAGGTCAGAGCTGGCAGAGGATTTTCACTTGAAGAGCTGAAGGCTGCTGGTATTCCCAAGAAGCTTGCTCCAACCATTGGCATTTCTGTCGACCACCGTCGTAGGAACCGTTCATTGGAAGGTCTCCAAGCTAATGTCCAGAGGCTGAAAACATACAAGGCCAAGCTTGTTGTGTTCCCAAGACGGGCACGCAAGGGCAAGGTCAAGGCTGGTGATTCAACGCCCGAGGAACTGGCTAATGCCACCCAAGTCCAGGGTCGATTCATGCCTATTGTGAGGGAGAAGCCAACAGTGGAGCTTGTTAAGGTTACTGATGACATGAAGGCATTTAAAGCTTATCAGAAGCTTCGCCTTGAACGCACAAACAAAAGACATGTTGGTGTCAGGCTGAAGAGGGCTGCTGAAGCAGAAAAGGAAGACAAGAAGTGA 630 0.4825 MVKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRARKGKVKAGDSTPEELANATQVQGRFMPIVREKPTVELVKVTDDMKAFKAYQKLRLERTNKRHVGVRLKRAAEAEKEDKK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0419 209 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
Acco12g0419 209 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Acco12g0419 209 Coils Coil 201 209 - -
Acco12g0419 209 PANTHER 60S RIBOSOMAL PROTEIN L13 1 209 IPR001380 GO:0003735|GO:0005840|GO:0006412
Acco12g0419 209 Pfam Ribosomal protein L13e 7 187 IPR001380 GO:0003735|GO:0005840|GO:0006412
Acco12g0419 209 FunFam 60S ribosomal protein L13 168 209 - -
Acco12g0419 209 Gene3D - 169 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0419 Acco-ChrAcco12 3656429 3657637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0419 2 194 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 84.974 2.71e-124 348