Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0416 ATGGGATATGATTCCGATAGCCCCTCACAAGATGGGAGGGATGAAGATGATGATGAAGAATATGAGGAGGCCGGCAAGGGCAACCGTTTGCTGGGATTCATGTTTGGAAATGTTGATAATTCTGGTGATCTTGATGTTGATTACCTTGATGAGGATGCAAAGGAGCATCTTTCTGCACTTGCTGACAAGCTGGGTCCGTCCCTGACAGATATAGATTTGTCAGGAAAATCGCCACGAACACCACCTGAAGTTGTTGAACAAGACTATGGTGATAAAGCTGAAGATGCAGTTGATTATGAAGATATTGATGAAGAGTATGATGGTCCAGAGACAGAAGTTGCAAATGAAGAGGAAAATTTATTGCCCAAAAAGGAATATTTTTCAGTTGGAGCCTCTCTTGAAGCTTTGAAATCCAGATCTTCTGTCTTTGATGATGAAGATTACGATGAGGAATCTGAAAAGGAGCAAGATTTGGTGAAGGACACTTCTGAAGTTAATAACATCTCTTCAACTGGGGAGCCAGTAGAGTCTCTTGCTGACGCATCTAATGGAGAGAAAAGTCAAGAAAAATCACATGATGGCTCACAGCAGTCTGAAGAATCGGACACAGACTTGCAAAAACTCCAGGAGGAAGGGCCTGAAGTTTTGAAAGGTTCTACTCCATTGCCTGTTTTATGTGTTGAAGACGGGATGGTCATTTTAAGGTTCTCTGAGATTTTTGGTATTCATGAACCTTTGAGAAAGGGAGGGAGGAGAGAGCAACGGCCTTCTATTCCTAGAGATAGACACAAGTCCTTTAATGCATCTGATATTGTAGAAGAGGATGAAGAGGCATTCTTCAGAGGTTCTTCTCACAGTGTCCTGATAAATAAACAGGCTTGTGCAGTTCAAAATGGCATGTCAGAAAGCAGTGATGCAGACTTGGATTCATCAAAATTTGGATCTCTGCATGGGGCTGCCTCAATGACTACGGAAGATAGCCCACAACAGAAAGACTCTTGCCGTAGTGGTGAACCAATGAAACAAGACTGCTCAGGCCTTTCTTGGGAAGGGCATTCTCTCTTGTGTGCTGACTTTTATCCCCTTGATCAGCAAGATTGGGAAGATGATATCATTTGGGGCAACTCCCCTGCTGCAAGTGACAATAATCGTGAGAGCTCTGAAATTTCTGGATCTGCGTTGGGGCTTCTAGGGTGTGATGAAGGAGAAATTGAAAGTGGGATGCTAAATATCCAGTTGGAGCCGCCAAAGGAATTGGAAGAAAAAAATCATAGCGTATTCTTGTGCACCTCTCCTGTCTCATTAGAGCCCTTTGGTTCAAGGGATTCTTCTGGAGCTGCAACTAATTCATTGTCGAAGAATCTATTTCACCCGCAACTCTTGAGGTTGGAATCCAGACCTGAAATGGATATCACTAATCCTGCAGATGACAGAAGGGAGAATATATCTGAGGAGCATAATCAAAATGGACTAGTAAAGCATTTCACCAAACTTACCTTGCAAAACCAGGATATGGTGGATGGGTCTTGGTTAGACAAGATTATATGGGATGAGGTCAATAGACCAATTGTGAAACCAAAGCTAATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAATTTCGGATAGTAAGGATGGTAGACATCTTCCCCTGCATGCAGGGGCGATGATTTTGACTCGTCCTTTAAAATCAAGCAATGGAGATTCTTCTGAGCTACCTGGACATGGAAATCAGCATGGATGGCGATCGATTGCTAATGATAAACATTATTCAAACAGGAAAACTTCTCAGCAATTGAAATCAAATTCTAAAAAACGCTCAGCTCATGGTGTAAAAGTTTTTCACGCTCAACCTGCGCTGAAGCTTCAGACTATGAAATTGAAACTGAGCAACAAAGATATTGCCAATTTTCACCGACCAAGAGCTTTATGGTATCCTCATGACAATGAGATGGCTGTCAAAGAACAAGGGAAGCTGCCAACACAAGGACCAATGAAAGTTATCATGAAGAGCGTGGGTGGCAAGGGGAGTAAACTGCATGTTGATGCTGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCATCGAAAAAGCTAGATTTCAAACCATTGGAAACAGTGAAAATATTTTATCTTGGGAAGGAACTTGAAGATCAGAAATCACTTGCTGCACAAAATGTTCGACCAAATTCCTTGTTACATCTAGTTCGTACGAAGATAAATTTGTGGCCTAGGGCACACAGGGTTCCTGGCGAGAACAAATCCTTGCGTCCACCTGGGGCATTCAAGAAAAAGTCTGATCTATCTGTTAAAGATGGACATGTTTTTCTAATGGAGTACTGTGAGGAAAGACCTTTGTTATTGAGCAATGCTGGAATGGGTGCCAGACTTTGTACATACTATCAAAAATGTTCTCCAGATGATCAAGGTGGCTCTTTATTACGCAACACAAACAGTAGTTTGGGGCATGTGATTTCACTGGATCCTGCTGATAAATCTCCATTTCTTGGAGATTTAAAGCCTGGCTGCAGTCAGTCATCATTGGAGACAAACATGTATAGAGCACCCATTTTTCCCCATACAGTGCCATTAACCGACTACTTGCTCGTTCGGTCATCAAAGGGAAAGCTGTCATTAAGAAGGATTGATAAAATTAATGTTGTTGGACAGCAGGAGCCTCTTATGGAGGTATTGTCACCTGGAAGTAAGAATCTTCAGACATATATGATGAACAGGCTACTGGTACACATGTGCCGTGAATTCCAAGCTGCAGAAAAGCGGCACTTACCTCCTTATATTCGTGCCGATGAGCTGCTGTCGCAGTTTCCTTACCTATCAGAAGCTTCTTTTCGCAAGAAAATTAAGGAGTATGCTATTTTACAGAAGGGAACAAATGGACTGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATGTGGTCGGAGGATGAATTGAGAAAAATGGTGACACCAGAGCTTGTTTGTGCTTATGAAAGTATGCAAGCTGGTCTCTATCGTCTAAAACATCTAGGAATTACTGAAACTCATCCTACTAATATATCTTCTGCTATGAGCCGCCTTCCTGATGAAGCAATTGCACTGGCGGCTGCATCTCACATTGAGAGGGAGTTGCAAATCACTCCATGGAACCTGAGTAGCAATTTCGTTGCCTGCACCAGCCAGGGGAAGGAAAATATTGAGCGATTGGAAATTACTGGTGTTGGTGATCCATCTGGGCGTGGTTTGGGTTTCAGCTATGCCCGGGCTACTCCAAAGGCACCAATGTCAAGCGCAGTGGTGAAGAAGAAAGCAGCCGCTGCCCGGAGTGGTTCCACTGTTACTGGAACAGATGCTGATCTACGCAGATTGAGCATGGAGGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCCGAGGAAGTCATTGCAAAACAAACCAGGTGGCATCGGATTGCTATGATACGCAAACTTTCAAGTGAACAAGCAGCATCTGGTGTTAAGGTTGACCCAACAACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAATTACAGCAGCAGACCAGGGAGAAGTGCCAGGAGATTTGGGATCGACAAGTTCAAAGTCTTTCAGCTGTGAATGGTGATGAAAATGAGAGTGATTCTGAAGGAAACAGTGATCTAGATTCTTTTGCTGGGGATCTAGAAAATTTACTTGATGCTGAGGAGTGTGAAGAGGGAGAAGAGGGTACCAATGATTTTAAACGTGACAAGGCTGATGGTGTCAAGGGTCTTAAAATGAGAAGACGTCCAACCTTAGCCCAGGCAGAGGAGGAAATAGAAGATGAAGCTGCCGAGGCTGCTGAACTCTGCAGATTACTCATGGATGATGAAGAAGATGAGAGAAAGAAAAAGAAAAAGACTAAATTTATCATGGATGAAGCAGGAGTAATTCCAAAACTACTGCCAAAATTTGTCTTTGACAATACAGATCAGGTGAAGCAAATAACTAGTAATGTGCAATTAGATGGAGCCAATATATTGAGAGAAAATACAGTTACAAATCTCAGGGAGGAGGATCGCATTTCTGCTAAAAAAAGCAATTTGTTGAAAGTCAATAAAACTAAGAAGAGTGACCTTTCACCTATCAGCATGGCAAATAAGAAAATAAAGTTAAATATTGGGGAACCGCCAAAGGTATTCAAGGAGAAAAAGCCATCAAGAGAAAGTTTTGTTTGTGGAGCATGTGGCCAGCTTGGGCACATGAGAACAAACAAGAACTGCCCAAAATATGGTGAAGATCCAGAAGCACAACTGGAATCTGCAGATGTGGAAAAAACGGGTGGAAAATCAAGCTTGTTAGATCCTTCTGGTCAGTCCCAGCATAAAGCCGTTTCCAAGAAGCTTCTTTCAAAAAGCTCATCAAAAATTGCTCTGGTTGAACCTTCTGAGGGAGAAAAAACTAGCGTGAAGGCGAAAGTTGTTCCGGTGAAGTTCAAATGCAGTTCCACTGAAAAACCTGTTATTGAAGCCACACAGAGCTCTGATAAGCCAGTCACTTCTGACTCAGAAACTGCCAAGTCTGCTAAGATTAGTAGAATCGTAATTCCCAACAAAGTGAAGTCAGATGATATGCAAGCTGAGTCTCGTAAGCATGCCATTGCGATACGCCCTCCAACTGCTCCAAGTAGAAGTCAAGTCGATTCTCATAAGCCATCAATTAAAATCCGACCACCTGCAGAAACTGATAGGGGGCAGCCTCAAAAGAAAATTATTATAAAGCGCACAAAGGATGTTATTGATCTGGATCAGTTCAGTCCCAGTGAAAGCATGGGATTTGAGCACAGAAAAACGAAAAGAATCGTTGAATTGTCAGGCATTGATAAGCACAGAAGACAGGAGGCCATGTATAGTCCTGAAGCTGCACTGGCAAGGCCGAAAGCTAAAGAGGATAGAAGGTGGTGGGATGAGCAAGGGAAAAGGAGAAAAGAAGAAAGACTCCGAGAAGAACGTGAGGAAGAAATGAGGATGCTGAAAGAGCAAGAACAAATGAGGTTGCTAAAAGAGCAACGTCAAATGAGGATGCTAAAAGGGCAAGAAAGGATAGCTGAGTTAAGAAGATTCGAAGAATCTATTAGGATGGATCGAGAGGAGGAAGAACGGCAGAAAGCAAAGAAGAAGAAGAAGAAGAAAAAGGCCGAATTTAGAGATGAGTATATCGATGACCACACAACAAGATTTAACAATAGAGGTTTAGAAAGGGAACGGAGTGGAAAAAGAAGATCTGTCGTTGAGTTGGGAAGATATGCAGCCGAATATACGCCACCACCTAAGCGGCGCAGAGGCGGAGGCGGAGAGGTTGGTTTGGCAAATATTTTGGAACGCATTCTCGAGGCGCTCAAAGAACGGTACGATCTGTCATTCCTTTTCTTAAAACCCGTGTCCAAGAAAGAAGCTCCTGACTACCTGGACATTATAGAGAGGCCTATGGATATTTCAACAATCAGGGATAGGGTGAGGAATATGGAGTACAAAAGCCGGGAAGATTTCCGGCACGATGTGTGGCAGATTGCATATAATGCCCACAGATATAACGATGGGAGAAACCCAGGAATTCCTCCTCTTGCAGATCAGCTTTTAGAACTTTGTGATTATTTGTTGAATGAGAATGATGATAGCCTAACTGAAGCTGAAGCTGGTATTGAAACTAGAGATTTCTAG 5706 0.4264 MGYDSDSPSQDGRDEDDDEEYEEAGKGNRLLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPRTPPEVVEQDYGDKAEDAVDYEDIDEEYDGPETEVANEEENLLPKKEYFSVGASLEALKSRSSVFDDEDYDEESEKEQDLVKDTSEVNNISSTGEPVESLADASNGEKSQEKSHDGSQQSEESDTDLQKLQEEGPEVLKGSTPLPVLCVEDGMVILRFSEIFGIHEPLRKGGRREQRPSIPRDRHKSFNASDIVEEDEEAFFRGSSHSVLINKQACAVQNGMSESSDADLDSSKFGSLHGAASMTTEDSPQQKDSCRSGEPMKQDCSGLSWEGHSLLCADFYPLDQQDWEDDIIWGNSPAASDNNRESSEISGSALGLLGCDEGEIESGMLNIQLEPPKELEEKNHSVFLCTSPVSLEPFGSRDSSGAATNSLSKNLFHPQLLRLESRPEMDITNPADDRRENISEEHNQNGLVKHFTKLTLQNQDMVDGSWLDKIIWDEVNRPIVKPKLIFDLQDDQMHFEISDSKDGRHLPLHAGAMILTRPLKSSNGDSSELPGHGNQHGWRSIANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHAQPALKLQTMKLKLSNKDIANFHRPRALWYPHDNEMAVKEQGKLPTQGPMKVIMKSVGGKGSKLHVDAEETLSSVKAKASKKLDFKPLETVKIFYLGKELEDQKSLAAQNVRPNSLLHLVRTKINLWPRAHRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNAGMGARLCTYYQKCSPDDQGGSLLRNTNSSLGHVISLDPADKSPFLGDLKPGCSQSSLETNMYRAPIFPHTVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIRADELLSQFPYLSEASFRKKIKEYAILQKGTNGLSILVKKRNFRMWSEDELRKMVTPELVCAYESMQAGLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSSNFVACTSQGKENIERLEITGVGDPSGRGLGFSYARATPKAPMSSAVVKKKAAAARSGSTVTGTDADLRRLSMEAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQAASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDFKRDKADGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDEEDERKKKKKTKFIMDEAGVIPKLLPKFVFDNTDQVKQITSNVQLDGANILRENTVTNLREEDRISAKKSNLLKVNKTKKSDLSPISMANKKIKLNIGEPPKVFKEKKPSRESFVCGACGQLGHMRTNKNCPKYGEDPEAQLESADVEKTGGKSSLLDPSGQSQHKAVSKKLLSKSSSKIALVEPSEGEKTSVKAKVVPVKFKCSSTEKPVIEATQSSDKPVTSDSETAKSAKISRIVIPNKVKSDDMQAESRKHAIAIRPPTAPSRSQVDSHKPSIKIRPPAETDRGQPQKKIIIKRTKDVIDLDQFSPSESMGFEHRKTKRIVELSGIDKHRRQEAMYSPEAALARPKAKEDRRWWDEQGKRRKEERLREEREEEMRMLKEQEQMRLLKEQRQMRMLKGQERIAELRRFEESIRMDREEEERQKAKKKKKKKKAEFRDEYIDDHTTRFNNRGLERERSGKRRSVVELGRYAAEYTPPPKRRRGGGGEVGLANILERILEALKERYDLSFLFLKPVSKKEAPDYLDIIERPMDISTIRDRVRNMEYKSREDFRHDVWQIAYNAHRYNDGRNPGIPPLADQLLELCDYLLNENDDSLTEAEAGIETRDF 1901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0416 1901 MobiDBLite consensus disorder prediction 93 114 - -
Acco12g0416 1901 CDD Ubl_TAFs_like 666 737 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1639 1661 - -
Acco12g0416 1901 Pfam Ubiquitin family 672 738 IPR000626 GO:0005515
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1207 1226 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1628 1661 - -
Acco12g0416 1901 Pfam Bromodomain 1788 1863 IPR001487 GO:0005515
Acco12g0416 1901 ProSiteProfiles Ubiquitin domain profile. 666 736 IPR000626 GO:0005515
Acco12g0416 1901 MobiDBLite consensus disorder prediction 563 611 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 162 182 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1447 1473 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 138 207 - -
Acco12g0416 1901 Pfam Protein of unknown function (DUF3591) 585 1152 IPR022591 -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1 28 - -
Acco12g0416 1901 SUPERFAMILY Ubiquitin-like 636 736 IPR029071 -
Acco12g0416 1901 ProSitePatterns Bromodomain signature. 1802 1859 IPR018359 -
Acco12g0416 1901 Coils Coil 1709 1731 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1497 1587 - -
Acco12g0416 1901 SUPERFAMILY TAF(II)230 TBP-binding fragment 24 62 IPR036741 -
Acco12g0416 1901 Coils Coil 1268 1288 - -
Acco12g0416 1901 SMART ubq_7 666 738 IPR000626 GO:0005515
Acco12g0416 1901 MobiDBLite consensus disorder prediction 183 207 - -
Acco12g0416 1901 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 13 1900 IPR040240 GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025
Acco12g0416 1901 FunFam Transcription initiation factor TFIID subunit 1 648 738 - -
Acco12g0416 1901 CDD Bromodomain 1787 1882 - -
Acco12g0416 1901 PRINTS Bromodomain signature 1848 1867 IPR001487 GO:0005515
Acco12g0416 1901 PRINTS Bromodomain signature 1800 1813 IPR001487 GO:0005515
Acco12g0416 1901 PRINTS Bromodomain signature 1830 1848 IPR001487 GO:0005515
Acco12g0416 1901 PRINTS Bromodomain signature 1814 1830 IPR001487 GO:0005515
Acco12g0416 1901 Gene3D - 648 738 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 591 605 - -
Acco12g0416 1901 SUPERFAMILY Bromodomain 1769 1890 IPR036427 GO:0005515
Acco12g0416 1901 Coils Coil 1655 1694 - -
Acco12g0416 1901 SMART bromo_6 1777 1887 IPR001487 GO:0005515
Acco12g0416 1901 Pfam TATA box-binding protein binding 17 61 IPR009067 -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1710 1730 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 300 340 - -
Acco12g0416 1901 Gene3D - 1701 1900 IPR036427 GO:0005515
Acco12g0416 1901 MobiDBLite consensus disorder prediction 300 335 - -
Acco12g0416 1901 Gene3D - 21 68 IPR036741 -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1419 1484 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 61 122 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1501 1523 - -
Acco12g0416 1901 MobiDBLite consensus disorder prediction 1565 1587 - -
Acco12g0416 1901 ProSiteProfiles Bromodomain profile. 1797 1867 IPR001487 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0416 666 736 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 36.620 1.86e-07 50.8