Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0415 ATGACTCTGAAGTTTCCAGCAATGCACAATGAAAGTTCAAAAGAAATAAGTAGGTTAGGCCTAGTGCTTCGCCTCTCTCCTCTCCAACTCTGGATCTCTCTCCAGCCTAGTCGAGATTTTCGTTCTTCACAGCGCGATCTGTGTTCTCAGCTTTCAGCTCACGTTCTTCACTCTTTCCTTTCTGGTCCTCTAAGCTTCCATGGTGAGGGTGAAGAGAGGTCACCAGTGACAATAATGGTGAGAGAGGAAACACAAATGAGGTGGGCTTGTCGTGTTCGAATCAAATTCAAACTTGAGCTCCAGTTTCTCAGCTCCATTATCGTTCTAGACTCATGTGATTTTAGTGCACGAAACATGTCACTTCTCAGCAGATTCTTTTACAGGAGACCTCCTGATGGTTTGCTGGAATTTGTCGATAGAGTATACGTTTTCGATTCCTGCTTTTCCACTGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATCACCGAGTTACATGAAGAGTTCCCAGACTCTTCCTTCTTCGCTTTCAATTTTCGAGAAGGGGAGAAACGTAGTCAATTTGCTGAAATTCTTTGTGAATACGATGTTACTGTCATGGATTATCCGCGACAGTATGAGGGTTGCCCTATTCTTCCAGTTTCTTTGGTTCAACATTTTCTTCGTGTTTGTGAGAGTTGGCTTTCACTTGGGAATCACCAGAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCACTCTTGGGGTTTCTTTTAGCTAGCTTTCTAATTTATAGAAGACTACACAGTGGTGAAAGGAAGACACTGGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTATTTTCGCCTTTGAACCCCTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCGCCGCCCGAGAGAGCTCTTTCTCTAGATTGTCTCATTCTCAGAGCCATTCCTAGTTTTGATACCCAGAATGGATGCAGACCCATGATCCGCATTTTTGGTAGAAATTTTCTCAGCAAGGGTGGGCTTTCCACTCAGATGCTCTACTCCATGCACAAGAAAAAGAAAACTTTAAGGCACTACCGTCAGGCAGACTGTGGTGTGATCAAGATTGACATACAATGTTTAGTACAAGGAGATGTGGTATTGGAGTGTGTCCATTTGGACTTGGATCCAGAGAGGGAAGTAATGATGTTCCGCATAATGTTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTACCCAAAAGGCTTCCGTGCTGAGGTCTTGTTTGGGGATGTTGAAAGCATATCTCCTCCAAAAGCCCCAACAACTGTGTTAAATGGCGAGGAGAAAGGTGGATTGCCCATTGAAGCCTTTTCAAGGGTTCAAGAACTTTTTAGTGGTGCAGAGTGGCTTGACAACGGTGAAGATGCTGCAGTCTGGTTGCTCAAACAACTTTCTGTGTTAAGTGATGTCAAAGAGCTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTTCTCATCACCGGCTGACTCTGAAGATGAAAATAACGAGTCAAGCACTGCGGATAGTTCAGATGAAGCCTTTGATGTTATTCCAAAGTCCTCTACTGATATTTCCAAGTTATTGGCACCTGACGACCCTGATCCTATCCATTTAGATTTTGAAAGTGTTGGCAGAAATAATGTGCATCTTACTTTAGAACCTCCCGACCCATCGACTGAAAGTGTTCCATTGTCTCATCATGCTCCTAGTAATGAATATCCTCACAATTCATCTCCACTGCCAGCACCCCCTCCACTTTGTCCACCTCTTTCTAATATCAGTGGAAATCCTTGCATCTCTCCTACAACTCCGGCAGCTAATTGCCAAAGCCTAATACCATCTCCTCCTCCTCCTCCGCCTCCTCCGCCGCCATTTGTCTCTTGCAAAACTTTGCCACCTTCCCCACCCGCTATGGGTAGTAAACTTAATGAGGTACCACAACAATTGTCACAGCCAGAGCCACCGCCACCGCCTCCGCTTCCCCCACCAATGCCACCTACAGTATCAAACATTTCAACTTCATCTAATACTGAGTCTCTCCAAGTGGCAAGACCTCCACCACCTGGTCAAGGCGCAATGCCACCACCTCCACCACCTGGTCAAGGCGCGATGCCACCACTACCTCCACCTCCTCCTCCTCCACCCAATCAAGGTGCAACGACACCTGCACCTCCCCCACCCCCTCCACCACTTGGTCGAAGCACAATGGCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCACCACTTGGTCGAGGCACAACGGCACCTACGCCTCCCCCTCCCCCTCCACCACCTGGTCGAGGCTCAACTGCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCACCACCTGGTCGAGGCTCAACTGCACCTCCCCCTCCCCCTCCACCCCCTAGTCGAGGCACAACGGTACCTACGCCTCCCCCTCCCCCTCCACTGCTTGGTCGAGGCTCAACAGCACCTCCCCCTCCCCCTCCACGACCTAGTCAAGGCACAACAACACCTCCCCATCCCCCTCCCCCTCCCCCTCCACCACCCGGTCGAGGTGCAACACCACCCCCACCCCCACCTCCACCAGCACCACTTGGTTGTGACACAAAGCGGCCTCCACCTCCACCTCCACCACCACTCGGTCGGGGTGCAGCACCTCCCCCACCTCCTCCACCACCTGGTCGGGGTGCAACACCTCCCCCGCCTCCACCACCTGGTCAGGGCGCACCACCACCTCCACTACCTAGTCGAGGCGCACCACCACCTCCTCCCCCTCTTGCAACTAGGGGATCTAGTGTGCCACCTCCACCCCTATCTACTACCAAAGATAAACCTTTAGCATCAACAAATTTTGGAAGAGGTCGAGGTTCTGGTGGGACTGCTAATGCACCAAAGAAAGCTTCGCTAAAGCCCCTACATTGGGTGAAAGTTACACGAGCAATGCAAGGGAGTCTATGGGCTGATACACCAAAACAAGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGAGTCTTTTTTCAGCAGCGTCTGCTTCTGATGTGAGCAATGCTAAAGGTGTAGGTCGCCGCGGTTCTAATATCAATAAACCTGAAAAAGTTCAATTGATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATCCCCTTGCCAGACATGCTTAATGCAGTTCTAGCTTTGGATTCTTCTGCTCTAGACATTGATCAAGTTGAAAATCTTATTAAGTTCTGCCCCACAAAGGAAGAAATGGAAATGTTGAAGAATTACGCTGGCAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTCATGGAGTTGATGAAGGTTCCACGAGTAGAAGCTAAATTACGGGTTTTTGCTTTTAAAATAACCTTTTCTAGTCAGGTGAATGATTTGAGATCAAATTTGAACACAATCAATGATGCTGCTAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACCTTGGGCAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGACACTCGAGCAAGGAATAACAAAATGACTTTGATGCATTATTTGTGTAAGCTTCTTTTTGAGAAGATGCCAGAATTGCTAGATTTTGGCAAGGATCTTGTTCATTTGGAAGCTGCTTCAAAGATCCAACTAAAAGCATTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAACTTACTGCTTCAGAAAATGATGGTTTTATTTCTGCAGGCTTCCGTAAGGTGTTGAAAAATTTTCTTGATATTGCTGAAGCTGAAGTGAGGTCACTCATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAATCCTGGCTGTCTTCGTGAAGATGTTCAACAAATCAAGGGAGGAGAATGAAAGGCTGGCAGACGCCGAAAAGAAGAAATTGGAGAAAGAAGCCATCAAAGAACAAAGAACACCTGTAAATACAAATTTAAAAAAAGATGTTCACTAG 4221 0.471 MTLKFPAMHNESSKEISRLGLVLRLSPLQLWISLQPSRDFRSSQRDLCSQLSAHVLHSFLSGPLSFHGEGEERSPVTIMVREETQMRWACRVRIKFKLELQFLSSIIVLDSCDFSARNMSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLVQHFLRVCESWLSLGNHQNVILLHCERGGWPLLGFLLASFLIYRRLHSGERKTLEMVHREAPKGFLQLFSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCLILRAIPSFDTQNGCRPMIRIFGRNFLSKGGLSTQMLYSMHKKKKTLRHYRQADCGVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRIMFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEVLFGDVESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGAEWLDNGEDAAVWLLKQLSVLSDVKELSRLQGKASWFSSPADSEDENNESSTADSSDEAFDVIPKSSTDISKLLAPDDPDPIHLDFESVGRNNVHLTLEPPDPSTESVPLSHHAPSNEYPHNSSPLPAPPPLCPPLSNISGNPCISPTTPAANCQSLIPSPPPPPPPPPPFVSCKTLPPSPPAMGSKLNEVPQQLSQPEPPPPPPLPPPMPPTVSNISTSSNTESLQVARPPPPGQGAMPPPPPPGQGAMPPLPPPPPPPPNQGATTPAPPPPPPPLGRSTMAPPPPPPPPPPPLGRGTTAPTPPPPPPPPGRGSTAPPPPPPPPPPPPGRGSTAPPPPPPPPSRGTTVPTPPPPPPLLGRGSTAPPPPPPRPSQGTTTPPHPPPPPPPPPGRGATPPPPPPPPAPLGCDTKRPPPPPPPPLGRGAAPPPPPPPPGRGATPPPPPPPGQGAPPPPLPSRGAPPPPPPLATRGSSVPPPPLSTTKDKPLASTNFGRGRGSGGTANAPKKASLKPLHWVKVTRAMQGSLWADTPKQDNQSRPPEIDISELESLFSAASASDVSNAKGVGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSALDIDQVENLIKFCPTKEEMEMLKNYAGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSSQVNDLRSNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLFEKMPELLDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGFISAGFRKVLKNFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILAVFVKMFNKSREENERLADAEKKKLEKEAIKEQRTPVNTNLKKDVH 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0415 1406 Coils Coil 1368 1388 - -
Acco12g0415 1406 Gene3D Formin, FH2 domain 994 1378 IPR042201 -
Acco12g0415 1406 FunFam Formin-like protein 993 1379 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 631 647 - -
Acco12g0415 1406 Pfam Formin Homology 2 Domain 997 1368 IPR015425 -
Acco12g0415 1406 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 319 456 IPR035892 -
Acco12g0415 1406 Gene3D Protein tyrosine phosphatase superfamily 131 309 IPR029021 -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 687 706 - -
Acco12g0415 1406 Pfam C2 domain of PTEN tumour-suppressor protein 317 455 IPR014020 -
Acco12g0415 1406 Coils Coil 1172 1192 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 967 981 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 648 669 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 614 629 - -
Acco12g0415 1406 SMART PTEN_C2_2 316 1121 IPR014020 -
Acco12g0415 1406 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1068 1394 - -
Acco12g0415 1406 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 135 305 IPR029021 -
Acco12g0415 1406 SMART it6_source 688 1404 IPR015425 -
Acco12g0415 1406 Gene3D - 315 460 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 707 721 - -
Acco12g0415 1406 PANTHER FORMIN-J 906 1391 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 527 552 - -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 725 966 - -
Acco12g0415 1406 Coils Coil 1274 1301 - -
Acco12g0415 1406 ProSiteProfiles Formin homology-2 (FH2) domain profile. 993 1393 IPR015425 -
Acco12g0415 1406 MobiDBLite consensus disorder prediction 586 1004 - -
Acco12g0415 1406 ProSiteProfiles C2 tensin-type domain profile. 318 457 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0415 Acco-ChrAcco12 3612633 3626337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0415 119 576 FH2 protein (formin) Gene Family AT1G31810 73.799 0.0 756