Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0411 ATGTTTGGAGGCGGAGAAGGCGAGGCCCTGGCCCGATTGGGCATCATGACGCCGTCATTCCTCAAACCGGCTACGTCGTCGGTGATTTCCGGTGAGATGTCACCATCGACGGGAGCTGCGCCTGTGAGGGAGGACAGGGCTCCCGCGCAGCCGCAGTGGAGCCAGCAGGAGACGAGGGAGTTTATAGCGATCCGCGCGGAGTTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAGACCCTCTGGGAGGTTGTCAGTACCAAGATGAGGGAGCGAGGCTTCAGGAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGTTATAAGGGGAAGGAGACATCAGATCCAGAGCATGGGAGACAGTGTCCCTTTTTTGAAGAATTACATGCCATCTTTGCTCAAAGGGCACAGAACATGCAGCGGTTGCTTCTTGAATCTGAAGGCCGATCAACTCAGACAAAGAAGGGAATGAAAAGGGTAAGTGGAGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGGTTGAAGATGACAGTGAAGAGGAAAAACCTGTAAGAAGCAACCCTCGCAAAAGGAAAGCAGACAAAGGTGCTATGGAGAAGTCTTCAAGGGCAAGCAGTGCATCGGATGCTATCAGTAATACTGCCAATAGCATTCAGGAAATGCTTAAGGAATTTTTCCAACAGCAGCTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGCTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCAGGCAAGGAGGGAGAGAGAAGAGCAGAGAAGAATCAGAGAAGATAGCCGAGCAGAAAGGAGAGATGTACTGTTGACAACTCTTTTAAACAAGCTCATCCATGAATCTAATTAG 939 0.4984 MFGGGEGEALARLGIMTPSFLKPATSSVISGEMSPSTGAAPVREDRAPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSTKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAIFAQRAQNMQRLLLESEGRSTQTKKGMKRVSGDRSSEEFSEDDDEVEDDSEEEKPVRSNPRKRKADKGAMEKSSRASSASDAISNTANSIQEMLKEFFQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQARREREEQRRIREDSRAERRDVLLTTLLNKLIHESN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0411 312 MobiDBLite consensus disorder prediction 186 205 - -
Acco12g0411 312 SMART sant 49 111 IPR001005 -
Acco12g0411 312 Gene3D - 53 114 - -
Acco12g0411 312 Pfam Myb/SANT-like DNA-binding domain 51 135 IPR044822 -
Acco12g0411 312 MobiDBLite consensus disorder prediction 155 170 - -
Acco12g0411 312 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Acco12g0411 312 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Acco12g0411 312 MobiDBLite consensus disorder prediction 149 216 - -
Acco12g0411 312 CDD GT1 51 116 - -
Acco12g0411 312 Coils Coil 257 294 - -
Acco12g0411 312 MobiDBLite consensus disorder prediction 171 185 - -
Acco12g0411 312 MobiDBLite consensus disorder prediction 26 56 - -
Acco12g0411 312 PANTHER FI21293P1 44 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0411 Acco-ChrAcco12 3563762 3565250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0411 51 307 Trihelix Transcription Factor Family AT2G38250 46.512 8.70e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco12g0411 Myb_DNA-bind_4 1.3e-22 CL0123