Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0408 ATGAAATGGCAATGGCCATGGCTTCTTTATGTTCTGCTGATATGTCATGTAATCAAAAGGAATGAAGCAATCAGTTCTGATGGAGAGGCACTTCTTAACTTCAGGACAGCAGTTAGCCCCAATAGTGACCTGTTACCTTGGAGGCCTGAGGATCCTGATCCATGTAAATGGAAAGGAGTAAAATGTGATCCCAAAACCAAGAGAGTGACAAATCTGTTTCTGGATCATCTCAGATTAAGTGGGTCTATTTCAGCTGACCTTGGGAATCTAGAGCATCTGAGGATTCTTGCTCTTAACAACAACAACTTATATGGGACTATTCCATCAGAACTAGGAAATTGCACTGAATTGCAAGAAATTTATTTGCATAGTAACTACCTTAGTGGAGTGATCCCAAGTGAAATTGGAAATCTTTCACAACTTCAAAATTTGGATATATCAAGTAACTCTCTCAGTGGGAGTATTCCCCCATCACTTGGGAAATTATATAGTCTAAAAAATTTCAATGCCTCGTTCAATTTTCTGGTTGGACCAATACCTTTGGACGGTGTGCTTGCCAACTTCTCTGAAAGCTCCTTTCTTGGAAATCTTGGTTTGTGTGGAGTGCAAATTAATTCAACGTGTAAGAATGATGGTTCGCCTAAACCCAATCCTCTATCTTCAATTTCAGACCAAAATGGAAAGAGGAAAGATTCTGGCCGGCTGCTTATTAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATCACCGAGAAAGTCTAGCAATGGATGTCTGTGGAGGGGCATCCATTGTTATGTTTCATGGAGATCTACCATATTCTTCAAAAGATATTATTAAAAAACTTGAGACTTTAAATGAGGAACACATAATTGGTTGTGGAGGATTTGGAACAGTTTACAGGCTTGCAATGGATGATGGAAATGTATTTGCTTTGAAAAGGATTGTAAAGTTAAATGATGGCTTTGATCGATTTTTTGAGAGAGAGCTTGAAATTCTTGGAAGCATAAAACACAGATATCTTGTGAACTTAAGAGGATATTGCAATTCACCTTCATCAAAGTTGTTAATATATGATTACCTACCTGGTGGTAGTCTTGATGAGGCTCTTCATGAAAGATCTGAGCACCTGGATTGGGATTCACGCTTGAATATCATCTTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCTCCTAGGATCATACACCGTGACATAAAATCAAGCAATATTTTGCTTGATGGAAACTTGGATGCTCGAGTCTCTGACTTTGGACTTGCCAAACTTCTGGAGGATGAGGAATCTCACATCACTACCATTGTTGCTGGAACATTTGGTTATCTAGCTCCAGAATATATGCTAAGTGGTAGAGCAACTGAAAAGACTGATGTTTACAGTTTTGGTGTCTTGGTACTTGAAGTGTTGAGTGGAAAGCGGCCAACAGATGCATCATTCATTGAGAAGGGCCTCAATATTGTTGGTTGGTTAAATCATTTAATTACGGAAAACAGAGCCAGAGATTTAGTTGACCAGCAGTGTGAAGGAGTGCGGGTAGAGAGCCTGGATGCGTTGCTCTCTGTAGCTATACAGTGCGTATGCTCGAGTCAGGAGGATCGACCCACAATGCATAGAGTGGTCCAATTGATTGAATCAGAGGTGATGACCCCTTGCCCAAGTGACTTTTATGACTCCAACTCCGAATCATAG 1767 0.4052 MKWQWPWLLYVLLICHVIKRNEAISSDGEALLNFRTAVSPNSDLLPWRPEDPDPCKWKGVKCDPKTKRVTNLFLDHLRLSGSISADLGNLEHLRILALNNNNLYGTIPSELGNCTELQEIYLHSNYLSGVIPSEIGNLSQLQNLDISSNSLSGSIPPSLGKLYSLKNFNASFNFLVGPIPLDGVLANFSESSFLGNLGLCGVQINSTCKNDGSPKPNPLSSISDQNGKRKDSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNHRESLAMDVCGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYRLAMDDGNVFALKRIVKLNDGFDRFFERELEILGSIKHRYLVNLRGYCNSPSSKLLIYDYLPGGSLDEALHERSEHLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMLSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNHLITENRARDLVDQQCEGVRVESLDALLSVAIQCVCSSQEDRPTMHRVVQLIESEVMTPCPSDFYDSNSES 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0408 588 Gene3D Transferase(Phosphotransferase) domain 1 378 576 - -
Acco12g0408 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Acco12g0408 588 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 276 377 - -
Acco12g0408 588 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Acco12g0408 588 Pfam Protein kinase domain 304 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0408 588 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 71 178 - -
Acco12g0408 588 Gene3D Ribonuclease Inhibitor 24 209 IPR032675 -
Acco12g0408 588 ProSitePatterns Protein kinases ATP-binding region signature. 308 334 IPR017441 GO:0005524
Acco12g0408 588 ProSiteProfiles Protein kinase domain profile. 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0408 588 SUPERFAMILY L domain-like 37 203 - -
Acco12g0408 588 SMART serkin_6 302 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0408 588 SUPERFAMILY Protein kinase-like (PK-like) 287 569 IPR011009 -
Acco12g0408 588 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 185 - -
Acco12g0408 588 Gene3D Phosphorylase Kinase; domain 1 278 377 - -
Acco12g0408 588 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 378 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0408 Acco-ChrAcco12 3547403 3553022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0408 1 578 Receptor kinase-like Gene Family AT2G35620 72.884 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Acco12g0408 Pkinase 3.9e-45 CL0016