Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0367 ATGCCCGTATCGCAGGTCTACACTGTAGTTGCTGTCATTGCTCTCGTGACCGCTTTAAAGGTGAGATTTTTACCCATTCTTCTTCTTCTTCGCAACGTTGTTTTCTCGATCCTCTGTTCATCAGCTGAATTAAGCAAAATGACCATTGATATGCCATCGCCCGTGGCTCAAAGTATGAGAACAAACAGACCTTCCTTTAGTTCTAGTAATGGCTACGATGATACCCCTGTTCACAATCATGCTGGAGTTAACAATGGTGATGACTATGACAGTGATAGCTCCAATTTTGCACCACCCACACCTTCAACTCTAACAATGGCTATTCCAGCTGAACTAGCTGGAGCTGTGCCTTTGATGGATAGATTCCAGGCGGAGGGGTTTCTTAGATTAATGCAGAAACAAATTAATTCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGCCCGCAAACTCGAGAGAAGTTTACATTTGAGGACATGTTGAGTTTCCAAAAGGATCCTATACCAACATCATTGCTCAAGGTTAATGGGGACATGGTAAGCCGGGCAACCAAACTATTTCAGATCATTTTGAAGTACATGGGAGTAGATTCACCAGAACTAGTGAATCCAATAAGTCTAGATGAAAGGGTTGAGCTTGTAAGTAAACTTTACAAGCACAGTTTGAAGCGCTCAGAACTCCGAGATGAACTTTTTGTTCAATTATCAAAACAAACCAGAAATAACCCTGAAAGGCAATGGTTGATTAAAGCATGGGAGCTGATGTATTTGTGTGCATCCTCCATGCCACCAAGTAAAGACGTTGGAGGATATTTGTCTGAATATGTTCATAATGTGGCTCACAATGTGACAACTGATGGTGAAATCCAAGCCCTTGCGCTAAATACATTAAATGCCCTCAAGCGTTCTGTCAAAGCTGGTCCTAGACATATTATGCCTGGACGTGAGGAGATTGAAGCTTTGTTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCTTGGATGAAACTTTTGAAGAAATCACATATGACATGGCGACAACAGTTGCTGATGCTGTTGAGGATCTTGCAGGGATCATCAAATTGTCAACGTACAATAGCTTTAGTCTGTTTGAATGCCGTAAAGTTGTTACTGGGTCCAAATCACCGGATTCTGGAAATGAGGAGTACATTGGGTTGGATGACAACAAATATATTGGAGACCTCTTGGCAGAATTCAAGGTAGCAAAAGATCGAAGTAAGGGAGAAATCTTGCAATGTAAACTTATATTTAAGAAAAGGCTATTTCGAGAATCAGATGAAGCTGTGGCAGATCCTATGTTTGTGCAATTATGCTATGTACAATTACAACATGATTATATCTTGGGGAATTATCCTGTTGGAAGAGATGATGCTGCCCAACTGTCTTCATTGCAAATCCTGGCTGAAATTGGATTTGTTCGAGCACCTGAGTCTTGCACAGATTGGGATTCACTTCTGGAGAGATTTCTACCTAGACAGATTGCTATTACTCGAGCTAAACGGGAATGGGAGCTGGACATCCTTTCTCGCTACCATTCATTGGAACATCTGACAAAAGATGAGGCAAGGCAACAGTTCCTTCGCATATTGAGAGCACTACCTTATGGAAATTCGGTTTTCTTTCATGTTCGCAAAATTGATGATCCTATTGGACTTCTACCCGGAAAAATAATATTGGGCATTAACAAGAGAGGGGTTCATTTTTTCCGTCCTGTTCCAAAGGAATACCTTCACTCAGCTGAGTTAAGAGACATAATGCAGTTTGGAAGTAGCAATACTGCGGTATTTTTCAAAATGCGAGTTGCAAGTGTTCTACACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGTGTAGCTCTTCAGACTCATATCAATGATGTAATGTTGCGCCGATATTCCAAAGCACGGTCTGCTGCAGGTGGTTCTGTAAATGGAGATATTGGCAACAATCTGAAGAGTCCTACTTCAGACATATATGAAAGACGTGTTCAAGATCTGTCAAAAGCTGTTGAAGATTCTCAAAGAAATGTTGATAAATTGGTGGAAGAATTGCGGGAAAAACAAAATCAAGAAGAGAAAATGCAAGAAGAATTGGAGGCCTTGAAGGAATCCTTAAATGCTGATAAACAAAGTCTTGCGGAAGTTACTTGTGAATGTGATAGGCTCAGATCAATATGCAATGAAAAGGATAAGGCTATTCAGGCTGCAACTCTAGAGAAAAGGAATATGGAAGTAAGATTGACCAAGTTGAATAATCTGGTGTTAGAAAACACAAAAAAGGAGTCTGTTGAAGCAAACAACCAGGATTTGCATAAGCTTGAAAATGAGCTAAAAGTCAGTAAAGATGAGCTGCTTGCGGCAGAAGAAACCATTACAAGATTGACGAATGAAAAATTGGTTTTGGCACGGAAGCTATCAGAGCTGGAGAAGAGAAATGCTGATGAGAATGTTGTTCTTGAACGAAGATTTGAGCAAGAACGCAAAGCCTTGAAATCTCAAGTGAACGACCTTGAAAAAAAGCTAGAAGGATTTAGACAAGAATTAGCTGCTGCTGAAACCGCTTTATCAGTCAAGGATGCTGAGTTGGTTGCACTGCAGAATAATTTAAGGGAACTGGAAGAGCTAAGAGAAATGAAAGAGGACATTGATAGGAAGAATGAACAAACAGCTGCCATATTAAGGATGCAAGGAGCTCAATTAGCAGAAATGGAAGCTCTTTATAAAGAAGAGCAAGTTCTGCGGAAACGCTATTTCAACACAATAGAAGACATGAAAGGCAAGATAAGAGTTTATTGCCGTCGAAGGCCTCTTGGTGATAAAGAGATCAATGATAAAGAAAGAGATGTGCTGACCAGCATAGATGAGTTTACTATTGAACATCCATGGAAGGAGGATAAACCAAAGCAATTTGTGTACGATCGTGTATTTGATGATGATACTACGCAAGAAGATGTATTTGAGGATACAAGGTATTTGGTACAGTCTGCTGTAGATGGCTATAATGTCTGCATATTTGCTTATGGTCAAACCGGGTCTGGGAAAACGTATACAATCTATGGAACTGAAAACAACCCTGGGCTCACCCCACGCGCTACTGCAGAATTGTTCAAAATTTTAAGGAGAGAGAGTAACAAATACTCTTTTTCTTTAAAGGCATACATGGTGGAATTATATCAAGATACACTTGTAGATCTTCTGTTACCTAAGAATGCAAAGCGTTTAAAATTAGAAATCAAGAAGGATTCAAAGGGCATGGTGGCTGTAGAAAATGTGACAGTGTTGCCAATTTCAACCATGGAGGAACTGAATGACATAATAGAGAGAGGATCTGTACAACGGCATACATCGGGAACTCAAATGAACGAAGAAAGTTCGAGATCTCATCTTATATTGTCAGTTGTAATTGAAAGCACCAACCTCCAAACACAATCAATGGCGAGAGGGAAGTTGAGTTTTGTAGATCTTGCTGGGTCAGAAAGAATAAAAAAATCTGGTTCCACTGGTAGTCAACTTAAAGAAGCTCAGAGTATAAATAAATCATTATCAGCTCTTGGGGATGTCATCAGTGCTTTATCTTCTGGTGGTCAACACATTCCTTACCGGAATCACAAGTTGACAATGCTAATGAGTGATTCACTTGGCGGTAATGCTAAAACTCTCATGTTTGTGAATGTATCCCCGGCAGAATCAAACCTGGAGGAGACACACAATTCTCTTATGTATGCATCACGAGTGAGGTCGATCGTGAACGATCCAAGCAAGAATGTTTCGTCGAAAGAGGTGGCTCGGTTGAAGAAGTTGGTGGCATACTGGAAGGAGCAGGCAGGCCGGAGGGGTGATGAAGAAGAATTGGAAGAAATTCAAGAGGAACGGCCGGCGAAAGAGAGGTCAGATGGCAGGCATTCTTTGTAG 3945 0.4061 MPVSQVYTVVAVIALVTALKVRFLPILLLLRNVVFSILCSSAELSKMTIDMPSPVAQSMRTNRPSFSSSNGYDDTPVHNHAGVNNGDDYDSDSSNFAPPTPSTLTMAIPAELAGAVPLMDRFQAEGFLRLMQKQINSAGKRGFFSKRSVGPQTREKFTFEDMLSFQKDPIPTSLLKVNGDMVSRATKLFQIILKYMGVDSPELVNPISLDERVELVSKLYKHSLKRSELRDELFVQLSKQTRNNPERQWLIKAWELMYLCASSMPPSKDVGGYLSEYVHNVAHNVTTDGEIQALALNTLNALKRSVKAGPRHIMPGREEIEALLTGRKLTTIVFFLDETFEEITYDMATTVADAVEDLAGIIKLSTYNSFSLFECRKVVTGSKSPDSGNEEYIGLDDNKYIGDLLAEFKVAKDRSKGEILQCKLIFKKRLFRESDEAVADPMFVQLCYVQLQHDYILGNYPVGRDDAAQLSSLQILAEIGFVRAPESCTDWDSLLERFLPRQIAITRAKREWELDILSRYHSLEHLTKDEARQQFLRILRALPYGNSVFFHVRKIDDPIGLLPGKIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVASVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGGSVNGDIGNNLKSPTSDIYERRVQDLSKAVEDSQRNVDKLVEELREKQNQEEKMQEELEALKESLNADKQSLAEVTCECDRLRSICNEKDKAIQAATLEKRNMEVRLTKLNNLVLENTKKESVEANNQDLHKLENELKVSKDELLAAEETITRLTNEKLVLARKLSELEKRNADENVVLERRFEQERKALKSQVNDLEKKLEGFRQELAAAETALSVKDAELVALQNNLRELEELREMKEDIDRKNEQTAAILRMQGAQLAEMEALYKEEQVLRKRYFNTIEDMKGKIRVYCRRRPLGDKEINDKERDVLTSIDEFTIEHPWKEDKPKQFVYDRVFDDDTTQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTYTIYGTENNPGLTPRATAELFKILRRESNKYSFSLKAYMVELYQDTLVDLLLPKNAKRLKLEIKKDSKGMVAVENVTVLPISTMEELNDIIERGSVQRHTSGTQMNEESSRSHLILSVVIESTNLQTQSMARGKLSFVDLAGSERIKKSGSTGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEETHNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKEQAGRRGDEEELEEIQEERPAKERSDGRHSL 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0367 1314 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 144 326 - -
Acco12g0367 1314 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 328 431 - -
Acco12g0367 1314 SUPERFAMILY Prismane protein-like 881 942 IPR011254 GO:0003824|GO:0016491
Acco12g0367 1314 SMART MyTH4_1 165 324 IPR000857 GO:0005856
Acco12g0367 1314 Pfam Kinesin motor domain 944 1259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 ProSiteProfiles Kinesin motor domain profile. 938 1259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 Coils Coil 831 903 - -
Acco12g0367 1314 Gene3D MyTH4 domain 145 326 IPR038185 -
Acco12g0367 1314 Gene3D - 328 432 - -
Acco12g0367 1314 MobiDBLite consensus disorder prediction 55 96 - -
Acco12g0367 1314 PRINTS Kinesin heavy chain signature 1010 1031 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 PRINTS Kinesin heavy chain signature 1129 1146 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 PRINTS Kinesin heavy chain signature 1209 1230 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 PRINTS Kinesin heavy chain signature 1160 1178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 SUPERFAMILY Second domain of FERM 427 544 IPR035963 -
Acco12g0367 1314 SMART kinesin_4 936 1267 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco12g0367 1314 ProSiteProfiles MyTH4 domain profile. 165 324 IPR000857 GO:0005856
Acco12g0367 1314 PANTHER MYOSIN VII, XV 46 944 - -
Acco12g0367 1314 Coils Coil 774 822 - -
Acco12g0367 1314 SMART B41_5 325 549 IPR019749 -
Acco12g0367 1314 Gene3D - 441 542 IPR014352 -
Acco12g0367 1314 FunFam Kinesin-like calmodulin-binding protein 882 1261 - -
Acco12g0367 1314 MobiDBLite consensus disorder prediction 1285 1314 - -
Acco12g0367 1314 MobiDBLite consensus disorder prediction 55 75 - -
Acco12g0367 1314 FunFam Kinesin-like calmodulin binding protein 432 543 - -
Acco12g0367 1314 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 547 656 - -
Acco12g0367 1314 Pfam MyTH4 domain 218 322 IPR000857 GO:0005856
Acco12g0367 1314 Coils Coil 744 764 - -
Acco12g0367 1314 CDD FERM_B-lobe 444 542 IPR019748 -
Acco12g0367 1314 Gene3D - 1262 1310 - -
Acco12g0367 1314 CDD FERM_C_KCBP 546 652 - -
Acco12g0367 1314 ProSiteProfiles FERM domain profile. 329 643 IPR000299 GO:0005856
Acco12g0367 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 938 1287 IPR027417 -
Acco12g0367 1314 Coils Coil 667 729 - -
Acco12g0367 1314 CDD KISc_C_terminal 936 1261 - -
Acco12g0367 1314 Gene3D - 547 654 IPR011993 -
Acco12g0367 1314 Gene3D Kinesin motor domain 925 1261 IPR036961 -
Acco12g0367 1314 Pfam FERM central domain 435 549 IPR019748 -
Acco12g0367 1314 ProSitePatterns Kinesin motor domain signature. 1159 1170 IPR019821 GO:0003777|GO:0005524|GO:0007018
Acco12g0367 1314 SUPERFAMILY PH domain-like 549 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0367 Acco-ChrAcco12 3156279 3164780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0367 85 1309 Calmodulin-binding Proteins AT5G65930 73.360 0.0 1848