Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0366 ATGCTTTCCCTCCAATGCTGCACTAACCACCATCATCTTCATAAGAATCAGCCGCCGCCGCGCCGCCACAGGCCTGACATGAATCCACAGCCATGCATCTCCCTCTCCATCGTCGCCTTCATATGCATGCTGCAACTTCTTTTCCCGGCGGTGATGTCCCAACCTCACAACATGAGGACATACCAATACGTCTTTGGCCCCTTTGACGTCACTAACTACACAACTTTGAAAGTGATTCCACCGGCGTCGATCAACTTCGGAGCGCTCCAGGTGACTCCTGACACCGCCGGCAACATACCCCTCACTGACACTGCTGGCAGAATCCTCTTCCGACAACCATTCGAACTCTGGAAAGACACCGGAAAAGTTGCTTCCTTCAACACTTCATTCCTCATCAACGTTTTTCGCGTCAACAACACCACTCCCGGCGAAGGCGTCGCCTTCGTCATTGCTCCGAACCTCGACATTCCCCTAAACAGCCATGGCCAATACCTCGGACTCACCAACTCCACCACCGACGGCAGCGCCGACAACCACCTCGTCGCCGTCGAGCTTGACACAGTCAAACAAAACTTCGACCCTGACGACAACCACCTCGGACTTGACATCAACAGTGTCAAGTCAAAAAACAATGTCTCTCTGTCTCAATTCGGAATCCAGATCGCTCCGGACACCGCCAAATACTATGTAATCTGGATAGAGTACAACGGTTCAAGCAAGAAAATCAACATTTTCATCAGAGAACAACCAGACAGAAACGGACCTATAGTATCAAAACCTGAAAAACCGGTGTTAACTTCAGATCTAGATCTCAAAACCATCGTGAAACAGAACTCTTACATGGGGTTCTCTGCTTCCACCGGAACAACCTACCAATTAAACTGTGTTCTGAAATGGAACATGACAGTAGAGATTCTTTCAGAAAACAAGAAAAAGTGGCGATCTTTGAAGATGGGTTTGGGTATTGGGCTGCCACTGATGAGTTTGATTCTAGTGGGGATTGGTGGGTTAGTGTGTTATGTTTATAAGAAGAGGAGAAGAAGAAAGTTGGACGATGAACAGATTCTGGGGACTTTGAAGAGCTTGCCGGGAACGCCGAGAGAGTATTCGTTTAAGGAATTGAAGAAGGCGACGAACAATTTCAGTGAGAACAACAAGCTTGGAGAAGGAGGGTATGGGATGGTGTACAGAGGGATTTTGCAGAAAGAGAATAATTTGGAAGTTGCTGTTAAGAAATTCTGCAGAGATGCTATGAAATGCCAAGATGATTTCTTGGCTGAACTCTCCATTATCAATCGTCTTCGTCATAAGCATCTTGTTCGCTTACTAGGTTGGTGCCACAAGAATGGAGTGTTAGTGTTGGTATATGAGTTCATGCCCAATGGCAGCTTAGACAACCACCTTTTCTTTGAGGAAGGGAAACCAACAACACCTCTAAGTTGGAACTTACGTTACAAAATCATCTCAGGTGTAGCCTCAGCACTAAACTACCTTCACAACGAGTACGATCAAAAAGTAGTCCACAGAGATCTCAAAGCAAGCAACATCCTGTTAGACTCAGACTTCAACGCCCGCCTGGGAGACTTTGGCCTGGCTCGAGCCATTGAGCATGAGAAAACCTCGTACCTTGAGGTTGAAGGAATCCATGGCACGATGGGGTACATTGCGCCTGAGTGCTTCCACACAGGGAAGGCGACCCGACAGACAGATGTGTTCAGCTTCGGGGCAGTTCTTCTAGAAGTGGTGTGTGGCGAGAGGCCGTGGACAAAGAGGGAAGGGTTTCAGTTGTTGGTGGATTGGGTTTGGTATTTGTATGGTGAAGGTAGGATTCTTGAGGCAGTGGATAAGAGGCTAGGCAATGAGTATGAGGTTGAAGAAGCAGAGAGAATATTAAAATTAGGGTTAGCTTGTTCTCATCCTATTGCTGCTGAGAGGCCAAAGATGCAACGTATAGTTCAGATCATAAGTGGGGCTGTCCCTATGCCTTATGTGCCTCCAAGCAAACCTGCTTTTGTTTGGCCTGCTGTTGATTTTGGAAGCTTCTTGAGTGATCTCACAACTCCATCTTCTACCACTGGAAACACGCCTGTTCATAGAGATTCTGATCCTCTACATTCATCAAAGTGA 2127 0.4716 MLSLQCCTNHHHLHKNQPPPRRHRPDMNPQPCISLSIVAFICMLQLLFPAVMSQPHNMRTYQYVFGPFDVTNYTTLKVIPPASINFGALQVTPDTAGNIPLTDTAGRILFRQPFELWKDTGKVASFNTSFLINVFRVNNTTPGEGVAFVIAPNLDIPLNSHGQYLGLTNSTTDGSADNHLVAVELDTVKQNFDPDDNHLGLDINSVKSKNNVSLSQFGIQIAPDTAKYYVIWIEYNGSSKKINIFIREQPDRNGPIVSKPEKPVLTSDLDLKTIVKQNSYMGFSASTGTTYQLNCVLKWNMTVEILSENKKKWRSLKMGLGIGLPLMSLILVGIGGLVCYVYKKRRRRKLDDEQILGTLKSLPGTPREYSFKELKKATNNFSENNKLGEGGYGMVYRGILQKENNLEVAVKKFCRDAMKCQDDFLAELSIINRLRHKHLVRLLGWCHKNGVLVLVYEFMPNGSLDNHLFFEEGKPTTPLSWNLRYKIISGVASALNYLHNEYDQKVVHRDLKASNILLDSDFNARLGDFGLARAIEHEKTSYLEVEGIHGTMGYIAPECFHTGKATRQTDVFSFGAVLLEVVCGERPWTKREGFQLLVDWVWYLYGEGRILEAVDKRLGNEYEVEEAERILKLGLACSHPIAAERPKMQRIVQIISGAVPMPYVPPSKPAFVWPAVDFGSFLSDLTTPSSTTGNTPVHRDSDPLHSSK 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0366 708 FunFam probable L-type lectin-domain containing receptor kinase S.5 459 660 - -
Acco12g0366 708 ProSiteProfiles Protein kinase domain profile. 381 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0366 708 Pfam Legume lectin domain 62 310 IPR001220 GO:0030246
Acco12g0366 708 CDD STKc_IRAK 387 655 - -
Acco12g0366 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Acco12g0366 708 SUPERFAMILY Concanavalin A-like lectins/glucanases 61 305 IPR013320 -
Acco12g0366 708 PANTHER - 93 659 - -
Acco12g0366 708 MobiDBLite consensus disorder prediction 687 708 - -
Acco12g0366 708 CDD lectin_legume_LecRK_Arcelin_ConA 62 303 IPR001220 GO:0030246
Acco12g0366 708 SMART serkin_6 381 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0366 708 ProSitePatterns Protein kinases ATP-binding region signature. 387 412 IPR017441 GO:0005524
Acco12g0366 708 SUPERFAMILY Protein kinase-like (PK-like) 363 683 IPR011009 -
Acco12g0366 708 Gene3D Phosphorylase Kinase; domain 1 366 458 - -
Acco12g0366 708 MobiDBLite consensus disorder prediction 1 27 - -
Acco12g0366 708 Gene3D Transferase(Phosphotransferase) domain 1 459 660 - -
Acco12g0366 708 Gene3D - 61 319 - -
Acco12g0366 708 Pfam Protein tyrosine and serine/threonine kinase 384 654 IPR001245 GO:0004672|GO:0006468
Acco12g0366 708 FunFam probable L-type lectin-domain containing receptor kinase S.5 366 458 - -
Acco12g0366 708 ProSitePatterns Legume lectins beta-chain signature. 181 187 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0366 Acco-ChrAcco12 3149958 3154406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0366 87 666 Receptor kinase-like Gene Family AT3G53810 39.837 2.39e-129 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco12g0366 PK_Tyr_Ser-Thr 4.3e-49 CL0016