Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0359 ATGAAATATCGCCTCTTTAGAATCACAGGCTTTATGCTTTGGCTAATTACTTTGTTATGGAGCTTAACTGGCCATGTTTTGAGATTAGAGAGCTCCCCAGTCTCTCTTGTAGATCATACTGAACAAAGCTTTAATGGCTTACACCCACCTTTGAGCCGTCCAAGCCGATCTATTTTGTCCCTTTCGCATAAGCCCAATACGACACTTGTTGCTACCCTAGATGGGACAATGTACTTGGTAGAGGTTGGTTCTATGAGGGTAATATGGTCGTTTCCTACTGGATCACCAATCTATGGATCATATCAAGCTCCTCTCAATAAGGACAATGTTAAAGAAAATGTGTGTGCATTGGCTAGTGGGTTCTTGGAATGTGGAGATGACTGGGCACTATATATACAAAGCGAGCACTTTGGTAAAATGCGACTCTCAACATCTGTGGCAGATTTTGTTGCGGCTACACCTACCTTTTCAGATGATGGAGGTGTTATTCTTGGATCAAAACGAAGTACTTTGTATGAAGTTGATGCTATAAATGGAGAGCTCATTCAAAGCTATTCTGCTGATAATCTTTCTGCTCTGTGGAGTAATGAAATGCATAGTGCGACAACTATTGTCGGTACAGAGAATAAAGAGCTGGCTGGTCCTGCAATGCGAAGCACACCGGAGCTTCTGCTTAAAATAATTAGAACAGATTATTATCTAAAGGGTGTAAGTCCTAGATCTGGAAAAGTTTTGTGGACTATGAATGTTGCTGAATTTAAGGCTTCATTGTTCTGTGGACATGATGAAAATCTGTTCACTGAGGCTTCATTAGATTCAGAGGATAAATATGCCCCCAACAATGATTTTACTATGCCATATGCATGTCATGAGTTAAAAGAAGTGCATCGCTTGCGAAAGAACCTTCTTTTTGGTGACCCCACTGAAAGCTTACCTGAGGCCTATCGTGATCAGAAAATGCTTCCAGTGCCTACTTCAGATCTGATGCTTCTTCCACAATCTAATTTAGATGTATCATTAGATCAACATGATGGTAATATGAGGCTTCCTTCTTTTCCAAATGTGTTGCCTTCTTTGCCACAAAATTTTAATTCCCATGACAACGATGATAATGCAGCCGCTCTCCCTCAACCTCCCACAGAGATTAGTGCACGAGGGGAAGTTGATAGAAACAAGGTGGTAAAATGGCTAAGGTCACCTTTATTAATGCTTATGCTCTTACTTCTTGGTTTTTCATTGTACCATCTTCAAGTGGTCAAAAGGCTAGGTATGTGGATGGTCCAAAACGGCAGATCTGAAGTAAATGTCTCTCCTCCTAAGAAAAGAAGAGCCCACAAGTCAGGAAAAAACACTTGCGTTGATGACAAAAGAAATAAGCCTCTATCAGCAGAAGATGAGGATGTAATAGCAAGTAGCAAAATTGCTAGGGAAGCATTGCCACATGAAGAAAAAGTTGAAGAAGTGAATGGGCGTCAAATTGGTAAACTCTTCATATCAAATAAAGAAATTGCCAAGGGAAGTAATGGTACTATAGTCCTTGAGGGAATGTATGAAGGTCGGGCAGTTGCTATCAAGCGTTTGGTCCGAGCCCATCATGATATTGCTAGTAAAGAAATTCAAAATCTTATTGCATCTGACCATCATCCCAACATTGTCCGATGGCATGGGGTTGAATTTGATCAAGATTTTATATATCTTGCTCTGGAACGTTGCATATGCAATTTAGATGATTTTATTCAGACTTATTCAGATTGCTCTTCAAAACCAGTTTCTGGTATAAATCAATCTTCTGAATGTTTGAAGGTCCAAATAAATATGGGTAAGGATAACATGCAAGAGCTTTGGAAAGCAAATGGCCATCCGTCCTCTTTATTATTGAAGTTGATCGGGGATATGGTTTCCGGACTTGTTCATTTACACGAATTGGGAATAATACATCGTGATTTGAAACCTAAAAATATTTTGATAACTAAGGGAAGACATTTGGGTGCAAAAGTTTCTGATATGGGCATCAGCAAACGTCTTCTTGGAGATGTATCTTCCTTTAGTCATAATGGTACCGGTTGTGGCAGTTCTGGTTGGCAAGCACCAGAACAGCTTCATCAAGGAAGTCAAACTCGAGCTGTAGATTTATTTAGTCTTGGTTGTATTCTGTTTTTCTGCATAACTAAGGGAAGACATCCATTTGGAGAGCGTCTGGAACGTGATTCCAATATTGTGAAAGATAAAAAGGACCTTTCTCCAGTCAAGTTCATTCCTGAGGCTGAAGATCTTATTTCTGGTTTATTAAGCCCTACCCCAAAGTTCAGGCCAAAGGCTATTGAAGTGCTGCATCATCCTTTCTTATGGAGTTCTGAGATGAGACTTTCATTTCTTCGTGATTTTAGTGATAGGGTGGAAGTAGAAGATAGGAAGACTAGTTCTAATCTTTTAATGGCATTAGAAAGAATTGCACCAGAGACTTTAGGTGGTGCAAATTGGGGTGAAAAGATGGAACTTGCTTTCATTGAAAACATCGGTCAATACAGGCGATATAAGTTTGGCAGTGTTCGTGACTTGTTGCGGGTTATGAGAAATAAGCTGAATCATTATAGAGAATTGCCTCCCCAAATTCAGCAACTTCTAGGGCCTGTTCCAGAAGGATTCAACGAGTACTTTGCTAGTCGATTTCCTAAACTCTTAATTAGTGTGTATAAAATTGTACAGAAATATTGCAAGCAGGAGGCGTGCTTCCAAAGATATTTTAAAAATGTTGATTAG 2760 0.3964 MKYRLFRITGFMLWLITLLWSLTGHVLRLESSPVSLVDHTEQSFNGLHPPLSRPSRSILSLSHKPNTTLVATLDGTMYLVEVGSMRVIWSFPTGSPIYGSYQAPLNKDNVKENVCALASGFLECGDDWALYIQSEHFGKMRLSTSVADFVAATPTFSDDGGVILGSKRSTLYEVDAINGELIQSYSADNLSALWSNEMHSATTIVGTENKELAGPAMRSTPELLLKIIRTDYYLKGVSPRSGKVLWTMNVAEFKASLFCGHDENLFTEASLDSEDKYAPNNDFTMPYACHELKEVHRLRKNLLFGDPTESLPEAYRDQKMLPVPTSDLMLLPQSNLDVSLDQHDGNMRLPSFPNVLPSLPQNFNSHDNDDNAAALPQPPTEISARGEVDRNKVVKWLRSPLLMLMLLLLGFSLYHLQVVKRLGMWMVQNGRSEVNVSPPKKRRAHKSGKNTCVDDKRNKPLSAEDEDVIASSKIAREALPHEEKVEEVNGRQIGKLFISNKEIAKGSNGTIVLEGMYEGRAVAIKRLVRAHHDIASKEIQNLIASDHHPNIVRWHGVEFDQDFIYLALERCICNLDDFIQTYSDCSSKPVSGINQSSECLKVQINMGKDNMQELWKANGHPSSLLLKLIGDMVSGLVHLHELGIIHRDLKPKNILITKGRHLGAKVSDMGISKRLLGDVSSFSHNGTGCGSSGWQAPEQLHQGSQTRAVDLFSLGCILFFCITKGRHPFGERLERDSNIVKDKKDLSPVKFIPEAEDLISGLLSPTPKFRPKAIEVLHHPFLWSSEMRLSFLRDFSDRVEVEDRKTSSNLLMALERIAPETLGGANWGEKMELAFIENIGQYRRYKFGSVRDLLRVMRNKLNHYRELPPQIQQLLGPVPEGFNEYFASRFPKLLISVYKIVQKYCKQEACFQRYFKNVD 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0359 919 Gene3D Phosphorylase Kinase; domain 1 483 569 - -
Acco12g0359 919 CDD RNase_Ire1 786 915 - -
Acco12g0359 919 SMART PGNneu 848 902 - -
Acco12g0359 919 SMART ire1_9 61 92 IPR018391 -
Acco12g0359 919 SMART ire1_9 154 186 IPR018391 -
Acco12g0359 919 SMART ire1_9 221 249 IPR018391 -
Acco12g0359 919 SMART serkin_6 497 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0359 919 Gene3D Transferase(Phosphotransferase) domain 1 605 784 - -
Acco12g0359 919 Pfam Ribonuclease 2-5A 788 915 IPR010513 GO:0004540|GO:0006397
Acco12g0359 919 ProSiteProfiles Protein kinase domain profile. 497 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0359 919 SUPERFAMILY Protein kinase-like (PK-like) 497 787 IPR011009 -
Acco12g0359 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Acco12g0359 919 Pfam Protein kinase domain 500 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0359 919 MobiDBLite consensus disorder prediction 434 458 - -
Acco12g0359 919 PANTHER IRE1-RELATED 140 917 IPR045133 GO:0004521|GO:0004674|GO:0030968
Acco12g0359 919 Gene3D - 55 274 IPR015943 GO:0005515
Acco12g0359 919 Gene3D KEN domain 785 919 IPR038357 -
Acco12g0359 919 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 72 253 IPR011047 -
Acco12g0359 919 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 607 784 - -
Acco12g0359 919 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 489 569 - -
Acco12g0359 919 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 786 919 - -
Acco12g0359 919 ProSiteProfiles KEN domain profile. 785 917 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0359 Acco-ChrAcco12 3078382 3083965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0359 503 782 MAP Kinase Kinase Kinase AT1G09000 26.599 2.77e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Acco12g0359 Pkinase 1.3e-34 CL0016