Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0355 ATGACTCGTATTCTCAAATCCACGGACAACTCCACCTCCGCCGCCGCTATCACCGCTTTGGCGCCGCCTCCGGAGGCCGTCGCTTTGGAATCAGACTTCGTTGTCATCCTCGCGTCTCTGCTTTGCGCTCTCATATGCACCGTCGCACTAATAGCCGTCTGTCGCTGCACCTGGTTCCGTCGCGGTGGATCCGGAGCTGGCGGCGGAGCTCCGGGGCAGTCTCTGGCGAATAAAGGTCTGAAGAAGAAGGTGCTTCAGTCCATGCCGAAATTCCCTTACACTGAGAGCAATCCCGACAGGTGGTTGGCCACGTCGGAGTGCGCGATTTGCTTGGCCGAATTCGCCGGAGCCGACGAGATCCGAGTTCTCCCGCAGTGTGGCCACGGCTTCCACGCGGCCTGCATAGACACCTGGCTCGGATCCCACTCCTCGTGCCCTTCGTGTCGTCAGATTCTTGCTATGCCTCCTAGGTGCCGCCGGTGCGGCCTTTACCCTGCGGTTCGCGGCGTAGGATCCACCGGAACTAGCGCGGGTGAACCGGAGCTCAAATCCAGACACGACGATAATGCCACTACTGCTAATAATAATGATCATGTGAATAGCTCCACTAGCGAACACCAACGGCCTAGCGAACACCAACGGCCTAGGGATCATACTGGATTCCTTCCATAA 672 0.5833 MTRILKSTDNSTSAAAITALAPPPEAVALESDFVVILASLLCALICTVALIAVCRCTWFRRGGSGAGGGAPGQSLANKGLKKKVLQSMPKFPYTESNPDRWLATSECAICLAEFAGADEIRVLPQCGHGFHAACIDTWLGSHSSCPSCRQILAMPPRCRRCGLYPAVRGVGSTGTSAGEPELKSRHDDNATTANNNDHVNSSTSEHQRPSEHQRPRDHTGFLP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0355 223 CDD RING-H2_EL5-like 106 149 - -
Acco12g0355 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 154 IPR013083 -
Acco12g0355 223 SMART ring_2 107 148 IPR001841 -
Acco12g0355 223 MobiDBLite consensus disorder prediction 204 223 - -
Acco12g0355 223 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 25 162 - -
Acco12g0355 223 MobiDBLite consensus disorder prediction 170 223 - -
Acco12g0355 223 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Acco12g0355 223 SUPERFAMILY RING/U-box 92 159 - -
Acco12g0355 223 Pfam Ring finger domain 106 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0355 Acco-ChrAcco12 3042855 3043526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0355 28 188 C3H Transcription Factor Family AT1G20823 56.213 9.03e-56 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2480 11 37823904 37824482 Acco12g0355 12 3042855 3043526 CCT