Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0334 ATGGCCAGGTTTTTGCCTCTAGTTTCCACCATTTTCGTCGTCCTCCTCCTTCTCGTGGCCACTGAGATGGGGCCCATGGTGGCAGAAGCGAGGACATGCGAGTCTCAGAGCCACCGCTTCAAGGGAACCTGTTTCAGCAGAACTAACTGCGCCAACGTTTGCCGGACTGAGGGCTTCCCCGGCGGTCACTGCCGTGGCTTCCGCCGCCGCTGCTTCTGCACCCGCCCTTGCTGA 234 0.6068 MARFLPLVSTIFVVLLLLVATEMGPMVAEARTCESQSHRFKGTCFSRTNCANVCRTEGFPGGHCRGFRRRCFCTRPC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0334 77 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Acco12g0334 77 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Acco12g0334 77 SMART gth_4 32 77 IPR003614 GO:0006952
Acco12g0334 77 Pfam Gamma-thionin family 31 77 - -
Acco12g0334 77 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Acco12g0334 77 Gene3D - 31 77 IPR036574 -
Acco12g0334 77 PANTHER DEFENSIN-LIKE PROTEIN 1 11 74 - -
Acco12g0334 77 FunFam Defensin-like protein CAL1 31 77 - -
Acco12g0334 77 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Acco12g0334 77 CDD Knot1 42 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0334 Acco-ChrAcco12 2921904 2922273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0334 1 77 Plant Defensins Gene Families AT2G02100 64.935 7.02e-34 109