Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0324 ATGTCGCTTCTCATTCAATTTTACCGGCTGCAGAGCTGGTCCGAATTTCGGTCGCAGAGCTTTCTCTCTTCTACTCGACGGAACGAAACCTCCTTTTTCCTCTGTTCTGGGCTCTGCTCATCCATCCAATTGGGCTGCACATCAACACTACCACCATCTTCGTTTCGTTCATTGGCCGTTTTCGCTTCTGAGATCCACGCTGCTGACCGCAAAATGGCGAGGATTAAACCTCAAGCTCTCCTACAGCAAAGCAAGAGGAAAAGGGGGCCTTCTCGAATAAGTGCCACAACTATTATATTTTACAGCTTGATTCTTGTCTTGGTTGTGTTTTTCCTGTTCAGTGCGTACAAGCATTGGTCCCACAGGTCAAGATTTGCATCAGAGAATCACATTGCAATCTCTCAGGCTGAAAATTCTTTTGGAGACTCAAAAAAGTCTGAGCTGCCGGGATATGCTGTTTTGAATACCTCTAAAGGCTCCATAGTAATTGAACTTTACAAAGAAAGTGCTCCTGAAGTTGTTGATGAATTTATTGACTTATGTCAAAAAGGGCAATTCAAGGGAATGCTTTTCCACCATGTAATTAAGCACTATGTGATTCAGGCAGGGGAGAACCAAGGGACTGGAGCTACAGAAGATTGGAACCTGAGAGGAAAACAGTATACAAGTATGAAGCATGAAGCATTCATGCTTGGGACTTCCAAGGGCAAACACTTGAACAAAAAATTTGATCTTTTCGTTACAACTGCACCAATACCAGATCTCAATGAGAAGCTTATTATATTTGGCCGTGTCATCAAGGGAGAGGATGTTGTTCAGGAAATTGAAGAAGTGGATACAGATGAACACTTCCAGCCTAAAATTTCTATTGGAATACTTGATGTGACGCTCAAACAGAAGATCTGA 906 0.4272 MSLLIQFYRLQSWSEFRSQSFLSSTRRNETSFFLCSGLCSSIQLGCTSTLPPSSFRSLAVFASEIHAADRKMARIKPQALLQQSKRKRGPSRISATTIIFYSLILVLVVFFLFSAYKHWSHRSRFASENHIAISQAENSFGDSKKSELPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKGQFKGMLFHHVIKHYVIQAGENQGTGATEDWNLRGKQYTSMKHEAFMLGTSKGKHLNKKFDLFVTTAPIPDLNEKLIIFGRVIKGEDVVQEIEEVDTDEHFQPKISIGILDVTLKQKI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0324 301 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 72 301 - -
Acco12g0324 301 Gene3D - 136 301 IPR029000 -
Acco12g0324 301 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 153 295 IPR002130 GO:0000413|GO:0003755
Acco12g0324 301 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 148 297 IPR002130 GO:0000413|GO:0003755
Acco12g0324 301 SUPERFAMILY Cyclophilin-like 150 297 IPR029000 -
Acco12g0324 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 244 256 IPR002130 GO:0000413|GO:0003755
Acco12g0324 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 257 272 IPR002130 GO:0000413|GO:0003755
Acco12g0324 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 165 180 IPR002130 GO:0000413|GO:0003755
Acco12g0324 301 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 203 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0324 Acco-ChrAcco12 2815061 2819740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0324 144 297 U-box Gene Family AT5G67530 28.571 3.48e-15 73.9