Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0322 ATGGTAGCTGGCGCGCAGCAGCAGCAGCAACTACATCAGCCACAAGCTCAACCTCAATCGCAGCAACAGACTCAGCAAACTACAACCTCTGCGGAAGATGAGGCCTTAAAGAGGAACACGGATTGCGTCTACTTTCTTGCTTCCCCCTTGACATGCAAAAAGGGTAGTGAATGTGAATATCGCCATAGTGAGTATGCTCGGGTCAATCCCCGAGATTGTTGGTATTGGTTGAATGGCAATTGCTTGAATCCCAAATGTGCCTTCCGTCATCCGCCTCTTGATAGCTTCTTATCGCCACAGGCAGCCACTGCCGGTGGATCATCTGCACCCCCATCACAGACTGCACCTACTTCTGTACCACATGCACCTTATAATTCTACAAAGCCAGCTGTCCCTTGCATTTTCTTCCAGAAAGGGCTTTGCTTAAAAGGTGACCGATGTGCTTTTTTGCATGGACCAAATCCTAACACCAGTAATAAAGTTCCTCAGGTTCAGGCGATTAAGCAGGTTCCTGAGCCCCCAAGTTTTAAGAAGGTTTTTAGTGGCCCAGAAAAGTCAACCCAAGAACGGAAAATTTCCCAAGCAAATGTTGCAAAGCCAGTTGCAGTTCCAGGAGCTGAAGCTAAGCCTGCCCAAAAGGCTGAAACTGCTTCGCATAGAAATATAGCTGCCATAGAGAGGCATGCTCCACAACCAATGGGATTTGATAATGAGGCGTCTAGATTCAAGCTAGTAAATACTCCACCTGTCACCAATGGAACCACTGTTGCCAGGCCAAACCGGGTGTATCAATCCCATGCATCAGATGATCATAGTTTTCACAATGGCAAGGAAAGTGATGAATTCTTGAGAGAATCCTCACCTGGCTTTGATGTACTTGTGGAAGATGAACTGAGGAATTCAGATTACTATGATAGAGAGGACCAATATGGAAAAGCAGGAGGTCAACATGGCATGAACTTGGACTCTCTGAATGAATATGATTTAGGACATTCTGTAGATTATAAATCTGTAGCTGATATTGATCAAGAAAGATATTGTGGGCCACAAGGTTATGACTTGTATGACCATGTGCAAGAGACATATGACTGGGATCATCGTAGGAGTTCATCTGAAAGAATGGTCCGGGCAACAAGCCATTTAGATAGGATGACTCATCGCAGATCTGGCAGTCCTGAAAATGTTGGGGTTTCAGATCTTCGACATCGTTTATCTAAGCGCAGGAGGGTCAATGGTTTGAAATCTGTTGTGAATCATGATTATGCACATCAGAGTCATGATGATGAGCAAAGTCACCTATTCTCTTCTCAAAAGGATGCTCACCAGTTACCCCTGAATGAAAGCGCACTCAGTAATCGTTTCCGAGGCAGGATAAAGCTTCCGACAAATGGTGGTGAAGAATATGTGGAGAGGGAATCAGACAGGGGAAGAAATAGGAGGGCATTGTCACCTGGAACTATGCAAGCTCCTCACCCAGGTAGGTTCCGAGATAGACTGAGAGGAAGGGTGCAAGAAGATTTTGAGAGGAAAAACCTCATGGATCGACCCATGAGGAGAGAAATAAATGGGGACCAGGATGCTGATTTTGATGGACCAAAAAGTCTTACTGAACTACGAAATGGAAACAAAGGTAAGAATAAGGAGCATCAGGTGCTTGGGAAGAGGAAAAGTTTAAAGGAACAGCAACAATCTGAAGATGATTTCATGTTTGAAGGTCCAAAACCTCTTAGTGAGATTTTGAAGGAGAAGAAGGTGGCGACTGGCAAATCGTCTGAGAATAAAGAAGACAATAAAGACAGAGAAGTTACCAATGACTCGGAAGACACCTATGTTTTTGATGCACGAAATGGCACTTTGCCTGCAGATAAGGAAGATGTGAAGAACGAGGAATCCAAGTTTCACGTAATGGAGAACACGGTTGAAAGTGATACAGCCAAGACAGATGTTGCTCACGATCAATCATTTGAAGAAGGAATGATGGACAACGAAGTAGTAGAAGACCAGGAGTATGAAGGTGATGATCAGAAGGATGGTGATTATTACTATGAGCAAGTTGAGGAGGGAGACTACAATTTTGATGAAGGTGAAAATCCAGAGCAGGAAGGATACATGGATGATGAGGAGGATGGGGATGATTTTGCTAAGAAGATTGGTGTGATGCTCGCATGA 2169 0.4435 MVAGAQQQQQLHQPQAQPQSQQQTQQTTTSAEDEALKRNTDCVYFLASPLTCKKGSECEYRHSEYARVNPRDCWYWLNGNCLNPKCAFRHPPLDSFLSPQAATAGGSSAPPSQTAPTSVPHAPYNSTKPAVPCIFFQKGLCLKGDRCAFLHGPNPNTSNKVPQVQAIKQVPEPPSFKKVFSGPEKSTQERKISQANVAKPVAVPGAEAKPAQKAETASHRNIAAIERHAPQPMGFDNEASRFKLVNTPPVTNGTTVARPNRVYQSHASDDHSFHNGKESDEFLRESSPGFDVLVEDELRNSDYYDREDQYGKAGGQHGMNLDSLNEYDLGHSVDYKSVADIDQERYCGPQGYDLYDHVQETYDWDHRRSSSERMVRATSHLDRMTHRRSGSPENVGVSDLRHRLSKRRRVNGLKSVVNHDYAHQSHDDEQSHLFSSQKDAHQLPLNESALSNRFRGRIKLPTNGGEEYVERESDRGRNRRALSPGTMQAPHPGRFRDRLRGRVQEDFERKNLMDRPMRREINGDQDADFDGPKSLTELRNGNKGKNKEHQVLGKRKSLKEQQQSEDDFMFEGPKPLSEILKEKKVATGKSSENKEDNKDREVTNDSEDTYVFDARNGTLPADKEDVKNEESKFHVMENTVESDTAKTDVAHDQSFEEGMMDNEVVEDQEYEGDDQKDGDYYYEQVEEGDYNFDEGENPEQEGYMDDEEDGDDFAKKIGVMLA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0322 722 MobiDBLite consensus disorder prediction 1 32 - -
Acco12g0322 722 Gene3D - 124 189 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 174 218 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 688 708 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 540 567 - -
Acco12g0322 722 SUPERFAMILY CCCH zinc finger 128 152 IPR036855 GO:0046872
Acco12g0322 722 Pfam RNA-binding, Nab2-type zinc finger 132 152 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 266 288 - -
Acco12g0322 722 ProSiteProfiles Zinc finger C3H1-type profile. 127 154 IPR000571 GO:0046872
Acco12g0322 722 ProSiteProfiles Zinc finger C3H1-type profile. 67 93 IPR000571 GO:0046872
Acco12g0322 722 MobiDBLite consensus disorder prediction 576 608 - -
Acco12g0322 722 Gene3D - 23 94 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 688 722 - -
Acco12g0322 722 ProSiteProfiles Zinc finger C3H1-type profile. 36 65 IPR000571 GO:0046872
Acco12g0322 722 SMART c3hfinal6 128 153 IPR000571 GO:0046872
Acco12g0322 722 SMART c3hfinal6 37 64 IPR000571 GO:0046872
Acco12g0322 722 SMART c3hfinal6 69 92 IPR000571 GO:0046872
Acco12g0322 722 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 32 720 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 423 443 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 100 122 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 493 533 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 461 629 - -
Acco12g0322 722 Pfam Zinc-finger containing family 37 93 IPR041686 -
Acco12g0322 722 MobiDBLite consensus disorder prediction 99 122 - -
Acco12g0322 722 MobiDBLite consensus disorder prediction 464 479 - -
Acco12g0322 722 FunFam Zinc finger CCCH domain-containing protein 17 30 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0322 Acco-ChrAcco12 2795492 2798926 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco12g0322 zf-CCCH_3 2.1e-11 CL0537