Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0318 ATGTTCAAGGGATTCAGCATTGATGTATTCGTTGCTGCAGTGAACTTACTGCCCTATGCAGTTCCCTATAAGTTCATTCCATTTGGGGATGGTCACAGCAACCCTAGTATCACCGAGCTTGTTCGTCTAATCACAGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCGTATATCGAGTCTGGTCTAGTAGTTGTAGCACCTGTTGAGAAGGTAGAATCCAGCGCATGGGCTTTTATGAGGCCATTTACGCCGATGATGTGGTGTGTCACGGCAGTCTTCTTCTTAGTCACGGGGGCTGTTGTGTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGGCCTCCCAAAAAGCAAGTTGTGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTCGCTCACAGGGAAAATACAGTGAGCACACTTGGTCGCCTCGTGCTCCTTGTATGGCTATTTGTGGTTCTCATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAACAGCTTTCTTCCCCCATTAAAGGCATTGAAAGTCTAGTAAACAGCAAAGATCCTATCGGCTACTTGCAGGGTTCTTTCACTAGAGGTTACTTAATTGAGGAACTTGGCATTCATGAATCAAGGCTCATTCCTCTAAAAACAGGAATTGAGGCTGCTAAAGCATTAAAAGATGGTCCCAAGAAAGGCGGTGTTGCTGCATATGTTGATGAGCGTGCTTACATTGAGCTCTTCCTTTCAAGCCGGTGTGATTTTACTATTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACAGCCATTCTAGAACTGGCAGAAAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAATAGCGCATGCCTAGCACAAGGTGCGAAGCTTGAAGTGGACAGACTTGATCTTAAATCCTTCTGGGGCCTCTATTTGGTTTGTGGACTAGCCTGCTTGGTTGCCCTCCTCATCTATCTCATACAGATGGTGAGACAGTACTACAAACACTACTCAGATGAAATCGAGTCTTCCGGTGGCCAGAGCTCGATGTCCTCGCGCCTCCGGACTTTCCTAACGTTTGTGGACGAGAAAGAGGAGGAAGTTAAGCAACGGTCCAAGAGAAGGCAGCTCGAAAGGATCTCATACCAAAACAGCGGGAGTACTGCGGGTGGATTGTTGTCATCATCAACCATGTACTCCAACAAAGAATATGCTCAATCCGCTTCAAACAAAAGCATGGATTGTGCTTATGAGGCCTGA 1362 0.453 MFKGFSIDVFVAAVNLLPYAVPYKFIPFGDGHSNPSITELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAPVEKVESSAWAFMRPFTPMMWCVTAVFFLVTGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFAHRENTVSTLGRLVLLVWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKDPIGYLQGSFTRGYLIEELGIHESRLIPLKTGIEAAKALKDGPKKGGVAAYVDERAYIELFLSSRCDFTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILELAENGDLQRIHDKWLLNSACLAQGAKLEVDRLDLKSFWGLYLVCGLACLVALLIYLIQMVRQYYKHYSDEIESSGGQSSMSSRLRTFLTFVDEKEEEVKQRSKRRQLERISYQNSGSTAGGLLSSSTMYSNKEYAQSASNKSMDCAYEA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0318 453 CDD GluR_Plant 1 319 - -
Acco12g0318 453 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 398 IPR015683 -
Acco12g0318 453 FunFam Glutamate receptor 216 323 - -
Acco12g0318 453 Gene3D - 1 88 - -
Acco12g0318 453 FunFam Glutamate receptor 90 220 - -
Acco12g0318 453 SUPERFAMILY Periplasmic binding protein-like II 2 321 - -
Acco12g0318 453 FunFam Glutamate receptor 1 90 - -
Acco12g0318 453 Gene3D - 89 215 - -
Acco12g0318 453 SMART GluR_14 1 321 IPR001320 GO:0015276|GO:0016020
Acco12g0318 453 Gene3D - 253 281 - -
Acco12g0318 453 Gene3D - 282 318 - -
Acco12g0318 453 Pfam Ligand-gated ion channel 321 352 IPR001320 GO:0015276|GO:0016020
Acco12g0318 453 Pfam Bacterial extracellular solute-binding proteins, family 3 2 320 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0318 Acco-ChrAcco12 2750449 2763548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0318 1 419 Ion Channels AT3G51480 68.646 0.0 615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco11g2475 11 37788769 37791986 Acco12g0318 12 2750449 2763548 CCT
Acco12g0318 12 2750449 2763548 Acco12g0318 12 2750449 2763548 ECH
Acco12g0318 12 2750449 2763548 Acco11g2475 11 37788769 37791986 ECH