Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0315 ATGATTAACGTTTGGCTTGTGATGTTAATGATCCTCTCTAATGGGCTTTCTTCATCTTCGGGGGGCACGAATAATTCGGCATTACCTGAATTTGTAAATATTGGAGCACTCTTCTCTTTCAATACCACTGTAGGTAAAATTGCAAAAATAGCTATTGAAACAGCAGTTGCAGATATAAACTCTGATCCTTCCATTCTTGGAAAAACTAAACTGAGGGTCTCAATGCAAGAGGACTCCAAATATAGAGGTTTTCTGAGCATTTCTGAGGTCTTGGAGCTCATGGCAAGACAAACTCTGGCAATAATTGGTCCCCAGTCATCTGTAACAGCTCATGTCATATCTCATGTTGCCAACGAACTCCAAGTTCCACTTCTATCATTTTCAGCCACAGACCCTACCCTTTCTTCACTTCAATTCCCATTCTTTGTTAGAACTGCACCTAGTGATGTTTATCAGATGGCTGCAATTGCTGGGCTAGTAGATTTCTATGGGTGGAGAGATGTTATTGCAATTTATGCCGACGATGACCATGGGAGGAACGGAATTGGTTCCTTAGGGGATAAGCTTGCAGAGAGACGCTGTAAAATCTCATATAAAGCACCAATAAGCCCTGAAGCGACTAGGGAGGAGATTACTGATGTGCTTGTTCAGGTGGCTCTTGCTGAATCTCGGATTATAATTCTTCACACTAATGCTATTTGGGGCCCCCAGGTGTTTGATGTGGCAAAATATCTTGGGATGATGGGAACTGGGTATGTCTGGATAGCCTCCAGCTTTCTCAGTACTCTTCTGGACTCTGAGAATCCCATCCCTTCAGATCAAGCAGATAAAATTCAAGGAGTTCTTACACTGCGTGTGCACACACCTGATTCAGAGCTCAAGAGAAGGTTCTTTACTAGGTGGAAAAACTTGACTGGGGGAATGACTACTGATAGTCCGCTTGGATTGAACACCTTAGGACTCTATGCATATGATACTGTTTATATGCTTGCCCGTGCACTTGATACATTTTTCAAACAAGGGAACCGAATCACATTCTCTTATGATTTAAAGTTATCTCATCTACGTGGAGACAGCGTGCATCTTGATGCCGTGAAGATCTTTGATCAAGGAAATCTTTTGCGTACAAGTATATATGGGGTTAACATGACTGGGGTAACAGGACACATTAAATATGCAGCTGATGGGAATCCTATGAATCCATCATATGAAATCATCAATGTGATAGGAACTGGTTTAAGGAGGATTGGCTATTGGTCTAATCACTCTGGATTATCTGTTGATCCTCCAGAAGTTCTTTATTCAAAACCAGCCAATCTTTCCGGTGCAAATCAAAAGCTACTCCCTGTAATATGGCCTGGAGAAACAACCGAGAAGCCCCGCGGTTGGGTTTTTCCAAACAATGGAAGGTTCTTAAGAATTGGGGTGCCAAAAAGGGTTAGTTACCGAACATTTGTCTCACAAATTCCAGGCACTGACATGTTCAAGGGATTCTGCATTGATGTATTCATTGCTGCAGTGAACTTACTGCCCTATGCAGTTCCCTATAAGTTCATTCCATTTGGGGATGGTCACAGCAACCCTAGTAACACGGAGCTTGTTCGTCTAATCACAGCTGGCGTCTTTGATGCTGCAGTGGGTGACATTACGATTACAACAGAAAGAACAAAGATGGTGGATTTTACTCAGCCGTATATTGAGTCTGGTCTAGTAGTTGTAGCACCTGTTAAGAAGGTAGAATCCAGCGCATGGGCTTTTATGAGGCCATTTACGCCGATGATGTGGTGTGTCACGGCAGTCTCCTTTTTAGTCGTGGGCGCTGTTGTTTGGATCTTGGAGCATAGGCTGAATGATGATTTTCGAGGACCTCCCAAAAAGCAAGTTGTGACAATTTTGTGGTTTAGCTTTTCAACTATGTTCTTTGCTCACAGGGAAAATACAGTGAGCACACTTGGTCGCTTCGTGCTGCTTGTATGGCTATTTGTGGTTCTCATAATTAATTCAAGTTACACAGCAAGTCTGACCTCAATCCTCACAGTACAACAACTTTCTTCCCCCATTAAAGGCATTGAAAGTCTAGTAAACAGCAAAGATCCTATCGGCTACTTGCAGGGTTCTTTCACTCGAGGTTACTTAATTGAGGAACTTGGCATTCATGAATCAAGACTCATTCCTCTAAAAACAGAAATTGAGACTGCTAAAGCATTAAAAGATGGTCCCAAGAAAGGCGGTGTTGCTGCATATGTTGATGAGCGTGCTTACATTGAACTCTTCCTTTCAAGCCGGTGTGATTTTTCTATTGTAGGTCACGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCTAGAGACTCTCCTTTAGCAGTTGACCTTTCAACAGCCATTCTACAACTGGCAGAAAATGGAGATCTTCAAAGGATCCATGACAAATGGCTTTTGAATAGCGCATGCCTAGCACAAGGTGCTAAGCTTGAAGTGGACAGACTTGATCTTAAATCCTTCTGGGGCCTCTATTTGGTTTGTGGACTAGCCTGCTTGGTTGCCCTCCTCATCTATCTCATACAGATGGTGAGACAGTACTACAAACACTACTCAGATGAAATCGAGTCTTCCGGTGGCCAGAGCTCGATGTCCACACACCTCCGGACTTTCCTAACGTTTGTGGACGAGAAAGAGGAGGAAGTTAAGCAACGGTCCAAGAGAAGGCAGGTCGAAAGGATCTCATACCGAAGCAGCAGCAGTACTGCGGGTGGATCGTTGTCATCATCAACCATGTGCTCCTCCAACAAAGAATATGCTCAATCCGCTTCAAACAAAAGCATGGATTGTGCTTATGAGGCCTGA 2844 0.4339 MINVWLVMLMILSNGLSSSSGGTNNSALPEFVNIGALFSFNTTVGKIAKIAIETAVADINSDPSILGKTKLRVSMQEDSKYRGFLSISEVLELMARQTLAIIGPQSSVTAHVISHVANELQVPLLSFSATDPTLSSLQFPFFVRTAPSDVYQMAAIAGLVDFYGWRDVIAIYADDDHGRNGIGSLGDKLAERRCKISYKAPISPEATREEITDVLVQVALAESRIIILHTNAIWGPQVFDVAKYLGMMGTGYVWIASSFLSTLLDSENPIPSDQADKIQGVLTLRVHTPDSELKRRFFTRWKNLTGGMTTDSPLGLNTLGLYAYDTVYMLARALDTFFKQGNRITFSYDLKLSHLRGDSVHLDAVKIFDQGNLLRTSIYGVNMTGVTGHIKYAADGNPMNPSYEIINVIGTGLRRIGYWSNHSGLSVDPPEVLYSKPANLSGANQKLLPVIWPGETTEKPRGWVFPNNGRFLRIGVPKRVSYRTFVSQIPGTDMFKGFCIDVFIAAVNLLPYAVPYKFIPFGDGHSNPSNTELVRLITAGVFDAAVGDITITTERTKMVDFTQPYIESGLVVVAPVKKVESSAWAFMRPFTPMMWCVTAVSFLVVGAVVWILEHRLNDDFRGPPKKQVVTILWFSFSTMFFAHRENTVSTLGRFVLLVWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLVNSKDPIGYLQGSFTRGYLIEELGIHESRLIPLKTEIETAKALKDGPKKGGVAAYVDERAYIELFLSSRCDFSIVGHEFTRNGWGFAFPRDSPLAVDLSTAILQLAENGDLQRIHDKWLLNSACLAQGAKLEVDRLDLKSFWGLYLVCGLACLVALLIYLIQMVRQYYKHYSDEIESSGGQSSMSTHLRTFLTFVDEKEEEVKQRSKRRQVERISYRSSSSTAGGSLSSSTMCSSNKEYAQSASNKSMDCAYEA 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0315 947 FunFam Glutamate receptor 709 816 - -
Acco12g0315 947 Gene3D - 754 819 - -
Acco12g0315 947 MobiDBLite consensus disorder prediction 896 926 - -
Acco12g0315 947 CDD GluR_Plant 470 812 - -
Acco12g0315 947 Gene3D - 582 708 - -
Acco12g0315 947 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Acco12g0315 947 FunFam Glutamate receptor 148 301 - -
Acco12g0315 947 Gene3D - 50 400 - -
Acco12g0315 947 Pfam Bacterial extracellular solute-binding proteins, family 3 485 812 IPR001638 -
Acco12g0315 947 Gene3D - 465 581 - -
Acco12g0315 947 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Acco12g0315 947 SUPERFAMILY Periplasmic binding protein-like I 26 464 IPR028082 -
Acco12g0315 947 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 891 IPR015683 -
Acco12g0315 947 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Acco12g0315 947 MobiDBLite consensus disorder prediction 908 926 - -
Acco12g0315 947 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Acco12g0315 947 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Acco12g0315 947 PIRSF IGluLR_plant 1 945 IPR017103 -
Acco12g0315 947 FunFam Glutamate receptor 467 583 - -
Acco12g0315 947 FunFam Glutamate receptor 583 713 - -
Acco12g0315 947 Gene3D - 148 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0315 Acco-ChrAcco12 2737694 2741370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0315 5 913 Ion Channels AT3G51480 60.373 0.0 1168