Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0314 ATGTGCTTCACTTTGATACTAGTGACTTATGTTGCAAGTTTGTTTGTGTTTGTCAAAGAGAAGATCATGCAGAGAATATGGCTTCTTATTGTTCTTGTGATTTTCTACTGCGGCATTTATTCAAACGGAGTAAATGGTGTTCCTCCAAGACCCAACTCTGTCAACATTGGGGCAATTCTATCCTTCAATTCAACCATTGGCAAAGTTGCAAAAGTTGCAATTGATGCAGCAAAGGATGATATAAACTCCATTCCATCAGTTCTTAACGGAACTAAACTCAATATTTCATTCCAAGACACGGAACTGTCCACTGGTTTTCTCGGCATCATTGATTCGTTATTACTAATGGAGAAAAACACAGTGGCCATAATTGGCCCTCAATACTCAGTGATGGCTCACGTGATTTCACACATAGCCAATGAACTACAAGTACCCTTACTATCATTTGCAGCAACAGACCCTACCATGACTTCCCTTCAGTTCCCATATTTTGTCAGGACATCACAGAGTGATCAGTTTCAGATGGCCGCTGTGGCAGATATTGTCGACTACTATCAATGGAGGGATGTGATAGCAATATACATTGATGATGATCATGGAAGAAATGGGATACTTGCATTAGAAGATAAGCTAGCTGAGAAACGTTGTAAGATCTCATATAAAGCCCCTCTTAGGCCTAATAACATAAACAGAGAAGAAATAAACAATGCTTTAGTTGATGTCTTCACGAGGGAGTCAAGGGTTATAGTCCTCCACATATACCCTAGTTCTGGTCTAGATGTACTTAAAATGGCTAATTCAATAGGCATGTTGGGAAATGGCTATGTCTGGTTAGCCACTGATTGGCTTTCTACTGTTCTAGATACCGATCCATCTCGGTCATCTTCATACATGAATAACCTCCAAGGAGTTATAACTTTGAGAATGCACACACCAGATTCTGGGATGAAAAAGAATTTCACTTCCAGGTGGGGTAACTTGGTAAATGAGAAAGCTCCTGATCAGAGTCCTTTCATGTGGAACACTTATGGCCTTTATGCCTATGACACTGTTTGGGTCCTTGCATATGCACTTGACTCATTTTTCAATAGTAGAGGGACTTTATCATTCTCAAATGATTCAAGCCTGAACAAACTAATAGGTGATAGACTAGACCTGAATTCTGTTGGGGTCTTTGCTAATGGTAGTTTATTGTTGGAAGAAGTTATGAAGGTCAATAAAACTGGTTTAACAGGTCAAATCATGTTTAGTCCAGATGGTGAGCTTATGAATCCTGCTTATGAGATCATTAATGTGATTGGAACTGGGATTAGGAGGATTGGATTTTGGTTTAATTCCTCTGGTTTACACACTGGACAAGCACCTGGTCATTCAAATTCTTCAAGTAAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACTGCAACGCCTCGCGGTTGGGTTTTCGCCAGCAATGGAAGGACTTTAAGAATTGGGGTGCCTCTCAGGATCAGTAACCATGAATTCGTGTCGAGGATCGAAGGACCTGAAATGTTTGGAGGTTATTGTATTGATGTGTTCAAAGCTGCAGTTGACTTATTGCCTTATCCAGCTCCACACAAGTTTATCCCTTTTGGAGATGGTAAAACTAACCCATTAAACTCAGAACTTCTGCACAAAATCACAACCAGTGAGTTTGATGCTGTGGTAGGTGATATTACTATTACCACAAACAGAACAAAGATAGTGGATTTCACACAACCATATATTGAATCTGGGCTTGTTGTTGTGGCTCCTATTAGAAAATCATACTCTGATGCTTGGGCTTTCCTAAGACCATTCACTCCAATGATGTGGTTTGTGACTGGAATGTCTTTCTTTGTTGTGGGAGCAGTTGTTTGGATTTTAGAACGGCGAGTAAATGATGATTTTAGAGGTCCCCCTAGAAGACAGTTTGTGACCATTTTATGGTTTAGTTTTTCAACCCTGTTTTTTGCACATAGAGAGAGAACTTTGAGCACTTTGGGTCGCTTAGTGCTGATAATATGGCTATTTGTAGTTCTGATATTGAACTCCAGCTATATAGCAAGCCTAACCTCCATACTCACGGTGGAACAGCTTTCTTCACCTGTGAAAGGAATTGAAAGCTTAGCGACAAGCAAAGAACTTATTGGCTATTTGAGAGGTTCATTTGCAGAGAACTACCTCACTGAGGAACTCAACATTATGAAATCAAGGCTTGTGCCCTTGAATTCTCCATCAGAATATGAGAAAGCCTTGAAGGATGGACCTGCCAATGGTGGTGTTGCAGCAATAATTGATGAACGTGCTTACATGGAGCTCTTTCTTTCAACAAGATGTGAATTTGGAATCGTTGGTCCAGAGTTCACCAAAATGGGTTGGGGTTTTGCTTTTCCGAGAGACTCTCCTTTGGCAATAGACATGTCAACAGCAATCTTGAAGCTATCAGAGAATGGTGATCTTCAGAGAATACATGACAAATGGCTTTCAAGAAGTGCATGCAGTTCGGAAGGGTCAAAGCAAGGCATAGACAGATTAGAGCTACAGAGCTTCTGGGGTCTCTTCCTTCTCTGTGGCATTGCCTGTTTCATAGCTCTCCTTTGTTATTTCCTTCGCATGGCCTACCGTTTCAGCCGCCACTCCGACTCCAACCTCGTCGGCTCCTCCCACTCGGCTCGGCTCCGGTCATTTATTTCCTTTGTCAATGAAAAGGAAGATGAAGGGAAAAACTGCAACAAGCCGAAGAGAAGCAGAAAGGTAGTGAATGAAGATGGGTCCACCACGGATGGCTCCGATATTGACAGATAG 2811 0.4152 MCFTLILVTYVASLFVFVKEKIMQRIWLLIVLVIFYCGIYSNGVNGVPPRPNSVNIGAILSFNSTIGKVAKVAIDAAKDDINSIPSVLNGTKLNISFQDTELSTGFLGIIDSLLLMEKNTVAIIGPQYSVMAHVISHIANELQVPLLSFAATDPTMTSLQFPYFVRTSQSDQFQMAAVADIVDYYQWRDVIAIYIDDDHGRNGILALEDKLAEKRCKISYKAPLRPNNINREEINNALVDVFTRESRVIVLHIYPSSGLDVLKMANSIGMLGNGYVWLATDWLSTVLDTDPSRSSSYMNNLQGVITLRMHTPDSGMKKNFTSRWGNLVNEKAPDQSPFMWNTYGLYAYDTVWVLAYALDSFFNSRGTLSFSNDSSLNKLIGDRLDLNSVGVFANGSLLLEEVMKVNKTGLTGQIMFSPDGELMNPAYEIINVIGTGIRRIGFWFNSSGLHTGQAPGHSNSSSKGLYGVIWPGQTTATPRGWVFASNGRTLRIGVPLRISNHEFVSRIEGPEMFGGYCIDVFKAAVDLLPYPAPHKFIPFGDGKTNPLNSELLHKITTSEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKSYSDAWAFLRPFTPMMWFVTGMSFFVVGAVVWILERRVNDDFRGPPRRQFVTILWFSFSTLFFAHRERTLSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPVKGIESLATSKELIGYLRGSFAENYLTEELNIMKSRLVPLNSPSEYEKALKDGPANGGVAAIIDERAYMELFLSTRCEFGIVGPEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLSRSACSSEGSKQGIDRLELQSFWGLFLLCGIACFIALLCYFLRMAYRFSRHSDSNLVGSSHSARLRSFISFVNEKEDEGKNCNKPKRSRKVVNEDGSTTDGSDIDR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0314 936 CDD PBP1_GABAb_receptor_plant 55 449 IPR044440 -
Acco12g0314 936 Gene3D - 752 837 - -
Acco12g0314 936 SUPERFAMILY Periplasmic binding protein-like I 50 481 IPR028082 -
Acco12g0314 936 FunFam Glutamate receptor 727 834 - -
Acco12g0314 936 FunFam Glutamate receptor 485 601 - -
Acco12g0314 936 SUPERFAMILY Periplasmic binding protein-like II 466 832 - -
Acco12g0314 936 SMART GluR_14 491 832 IPR001320 GO:0015276|GO:0016020
Acco12g0314 936 Pfam Ligand-gated ion channel 832 863 IPR001320 GO:0015276|GO:0016020
Acco12g0314 936 Gene3D - 482 600 - -
Acco12g0314 936 Gene3D - 170 449 - -
Acco12g0314 936 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 54 896 IPR015683 -
Acco12g0314 936 MobiDBLite consensus disorder prediction 906 936 - -
Acco12g0314 936 CDD GluR_Plant 488 830 - -
Acco12g0314 936 PIRSF IGluLR_plant 20 934 IPR017103 -
Acco12g0314 936 Gene3D - 72 424 - -
Acco12g0314 936 Gene3D - 601 739 - -
Acco12g0314 936 FunFam Glutamate receptor 170 327 - -
Acco12g0314 936 FunFam Glutamate receptor 601 731 - -
Acco12g0314 936 Pfam Receptor family ligand binding region 72 434 IPR001828 -
Acco12g0314 936 Pfam Bacterial extracellular solute-binding proteins, family 3 549 831 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0314 Acco-ChrAcco12 2725580 2730381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0314 27 928 Ion Channels AT3G51480 56.326 0.0 1045