Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0313 ATGACAAGTAGTGGTAATAAGCCCACCGACAACGATGTAGGTCGTCCAATAATCATGGAAGATCGTAATAATAATAACGGCCACACTAATCATAACTCTTGTACCAATCCTGCCACCACTACTGGCAGGCCTCCTAGAGACGTTTCCTCTTTGCGTCATTGCACTAACTCGGAAGCAGATATAGAGAGCATGGAATTGAAAACACCGACGACGACGACTACTACGACAACAGCCGCGACGACGACGGAGGAAACGTCAGAGTTTTCTCCTGTATTCCGATCAGGAAGCTGTTCTGAGAAAGGACCAAAGCAGTACATGGAGGATGAGTTCATCGCTGTTGATACTCTCCATGAACATCTTCCTCCATCAGCAACTCACCTTCCTTCTTCTGCCGCATTTTACGGGATATTTGATGGGCACGGAGGTACAGATGCGGCATTATTCACGAGAGACAACATCCTAAAGTCTATAACGTCGGACTCACAATTCCCTGGCAGCATTAAAAAGGTCATCAGGAGTGCCTTTGTGAAGGTTGATCACGCCTTAGCTGATGCCGTTTCTCTTGATAAATCTTCTGGCACCACTGCTTTAATTGCTCTCATGCTCGGAAGGAGTATGATGATAGCCAATATAGGCGATTCTCGAGCTGTGTTGGGAAAACGAGGAAGAGCCATAGAACTATCCAAAGACCACAAGCCAAACTGCACTTCGGAGAGGTTAAGGATTGAGAAACTGGGAGGCGTAATCTACGACGGATACCTCAACGGGCAACTGTCAGTGGCAAGAGCACTAGGAGACTGGCACATAAAAGGGTCAAAAGGATCAAAGAGCCCATTAATCTCAGAACCAGAGCTTGAAGAACTGGTTCTAACACAAGACGACGAGTACTTAATAATGGGCTGTGACGGTTTATGGGACGTGATGAGCAGCCAGTGCGCTGTTTCGACGGTGAGGAGGGAGCTGATGCAGCACAATGATCCAGCAAGGTGTGCAAAAGCACTTGTGACCGAAGCGTTACAACGTAATACATGCGACAATTTAACTGTTGTTGTTGTCAGTTTCTCACAACATCCTCCTCCTAAGCTTCAAGTTCCTGTGTTGCATAAGAGGAGGAGCATTTCAGCTGAAGGCTTGGATCTTCTTAAGGGTGTCCTCTCTTGA 1161 0.4686 MTSSGNKPTDNDVGRPIIMEDRNNNNGHTNHNSCTNPATTTGRPPRDVSSLRHCTNSEADIESMELKTPTTTTTTTTAATTTEETSEFSPVFRSGSCSEKGPKQYMEDEFIAVDTLHEHLPPSATHLPSSAAFYGIFDGHGGTDAALFTRDNILKSITSDSQFPGSIKKVIRSAFVKVDHALADAVSLDKSSGTTALIALMLGRSMMIANIGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLISEPELEELVLTQDDEYLIMGCDGLWDVMSSQCAVSTVRRELMQHNDPARCAKALVTEALQRNTCDNLTVVVVSFSQHPPPKLQVPVLHKRRSISAEGLDLLKGVLS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0313 386 MobiDBLite consensus disorder prediction 67 99 - -
Acco12g0313 386 MobiDBLite consensus disorder prediction 22 51 - -
Acco12g0313 386 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Acco12g0313 386 SMART PP2C_4 83 352 IPR001932 -
Acco12g0313 386 PANTHER PROTEIN PHOSPHATASE 2C 80 353 IPR015655 GO:0004722|GO:0006470
Acco12g0313 386 SUPERFAMILY PP2C-like 82 356 IPR036457 -
Acco12g0313 386 MobiDBLite consensus disorder prediction 1 51 - -
Acco12g0313 386 Pfam Protein phosphatase 2C 94 346 IPR001932 -
Acco12g0313 386 MobiDBLite consensus disorder prediction 67 93 - -
Acco12g0313 386 SMART PP2C_SIG_2 117 354 IPR001932 -
Acco12g0313 386 CDD PP2Cc 92 354 IPR001932 -
Acco12g0313 386 ProSiteProfiles PPM-type phosphatase domain profile. 93 354 IPR001932 -
Acco12g0313 386 Gene3D - 70 358 IPR036457 -
Acco12g0313 386 FunFam Probable protein phosphatase 2C 22 76 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0313 Acco-ChrAcco12 2703333 2707650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0313 86 386 PP2C-type Phosphatase Gene Family AT3G51470 76.080 2.43e-170 476