Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco12g0299 ATGGGTCTCTGCTTCGGTTCTCCCGCTTCCCATGGTCACGATTTTAGCGCCAAAAGACTTCATACTAAAGGATCAGCGAGTTCTGAGAGTAGGAATGTTGAGTCATTTACAACAAACAGTACTGTGCAGAAGAGCCAATTCTCGATGGTTGCTAATGGAAGCGTCGATGGGTCCTATGCTTCTCCAAGTCGGCATGTTATAGAAATGTCTAATGTCTTGAAAGTTTTCAGTCTTGGAGATTTGAAAGCAGCCACCAAGAACTTTAAATTGGATTCATTGCTCGGAGAGGGCGGTTTTGGTAAAGTTTACAAAGGTTGGTTGGATGAGAGGACGCTTTCGCCGGCCAAAGCCGGCTCTGGAATTATGGTTGCTATAAAAAAACTCAATCCTGAGAGTATGCAAGGCTTTCAAGAGTGGCAGTCAGAAGTGAACTTCTTAGGCACCCTTTCTCACCCGAACCTGGTCAAGCTATTTGGTTACTGCATGGAGGATGGTGAACTTCTCCTTGTGTACGAGTTCATGCCCAAGGGAAGCTTGGAGAGTCATCTCTTCAGAAGGGGCTCTAACATGGAACCGCTTTCATGGAACACACGGCTCAAAATAGCTATTGATGCAGCACGAGGCCTGGCTTTCTTGCACACTTCAGAAAAGCAAATCATATACAGAGATTTCAAGGCCTCAAATATATTACTTGATGGGGGTTACAATGCAAAAATTTCTGATTTTGGCTTGGCCAAATTAGGGCCTACTGGAGAACAATCACATGTGACTACTAGGATCGTGGGCACATACGGTTATGCTGCCCCAGAATACGTAGCCACAGGGCACTTGTATGTTAAGAGTGATGTGTATGGGTTTGGTGTAGTGCTGCTTGAAATGCTGACAAGTTTAAAAGCACTTGATCCAAAGAGGCCATCTGGGCAGCAGAATCTGGCCGAGTGGGGTAAGCCATATCTCACCAGCAAAAAGAAGTTGAAAACCATAATGGACCCCAAAATAGAGGGTCAATATTCAATCAGTGCAGCATTTCAGGCAGGTCAGCTTATTCTCAAGTGCCTAGAACCTGAACCCAAGAATCGTGCTAGTATGAAGGAGGTAGTGGATGCATTGCAAGAAATTGAAGCTACCCAAAACAAGTCAAAAAATTTCAAGAGAAGCTGCCAATCTTCACCTCTTCATCATCATGATAAGAAGCCGATTCATCACCAATCAGTTCATGATGGCCATAGAAGCTTCAATCGATGA 1245 0.445 MGLCFGSPASHGHDFSAKRLHTKGSASSESRNVESFTTNSTVQKSQFSMVANGSVDGSYASPSRHVIEMSNVLKVFSLGDLKAATKNFKLDSLLGEGGFGKVYKGWLDERTLSPAKAGSGIMVAIKKLNPESMQGFQEWQSEVNFLGTLSHPNLVKLFGYCMEDGELLLVYEFMPKGSLESHLFRRGSNMEPLSWNTRLKIAIDAARGLAFLHTSEKQIIYRDFKASNILLDGGYNAKISDFGLAKLGPTGEQSHVTTRIVGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTSLKALDPKRPSGQQNLAEWGKPYLTSKKKLKTIMDPKIEGQYSISAAFQAGQLILKCLEPEPKNRASMKEVVDALQEIEATQNKSKNFKRSCQSSPLHHHDKKPIHHQSVHDGHRSFNR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco12g0299 414 CDD STKc_IRAK 94 373 - -
Acco12g0299 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Acco12g0299 414 Gene3D Transferase(Phosphotransferase) domain 1 174 399 - -
Acco12g0299 414 SUPERFAMILY Protein kinase-like (PK-like) 62 369 IPR011009 -
Acco12g0299 414 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Acco12g0299 414 Pfam Protein tyrosine and serine/threonine kinase 89 370 IPR001245 GO:0004672|GO:0006468
Acco12g0299 414 Gene3D Phosphorylase Kinase; domain 1 72 173 - -
Acco12g0299 414 PANTHER OS01G0588500 PROTEIN-RELATED 40 374 - -
Acco12g0299 414 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco12g0299 414 FunFam Serine/threonine-protein kinase PBS1 174 389 - -
Acco12g0299 414 MobiDBLite consensus disorder prediction 378 414 - -
Acco12g0299 414 FunFam Serine/threonine-protein kinase BIK1 55 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco12g0299 Acco-ChrAcco12 2606929 2610872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco12g0299 74 370 Glycoside Hydrolase AT3G07070 47.651 3.05e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco12g0299 PK_Tyr_Ser-Thr 1.2e-47 CL0016